Pedobacter gandavensis: QG516_19920
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Entry
QG516_19920 CDS
T09013
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_19920
Transporters [BR:
pgj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QG516_19920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Fibrillarin
Motif
Other DBs
NCBI-ProteinID:
WGQ08782
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Position
4739080..4740651
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AA seq
523 aa
AA seq
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MELEPLERIHEDLVFDEIDKNADYAKQFLNGTYLQLPDGYNRLLTAFLDAGTDDAVSSQD
GSIVEGFRTGLLSGQNVIDNQWLKNYTGIRRANIFLSKIDVVPTTAALKVQWRAEARFLR
AYFYFELLKRWGGVPLLGDKVYGLNDNLNLKRNTADECYDYILSEIEAVKDLLLPAVVVD
QNIGRANKGAALALKSRVLLYRASPLWNPNGDIQRWTAAANAAKDVMTLGNYSLGTDFIA
LFNTVKHSEIIFMKEQAQSQTVELYNGPIGYTEGTGNTSPSQNLVDAFLMKNGKLPADAG
SSYDPSNPYVNRDNRFAATIMYNTTKWLNRPVETFNGGKDRPGGSRTQTKTGYYLRKFMG
KFESSGTYSNQNHHVILFRYAEILLNYAEALNEASGPLNEAVDAIIAIRKRAGVSAGADN
RYGISASISQDQLRILIRNERRIEMAFEEQRFWDIRRWKIAGQVMNSPVKGMNIVKNADA
TFSYTVLDIAPSVFDISKNYLFPIPYSEIQTNPNMTQNPGYTY
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
gtggaattagaaccactggaaagaatccatgaagacctggtcttcgatgagatcgataaa
aatgcagattatgcaaagcaatttctaaatggtacttatctgcaattgcctgatggttat
aaccgtctgctgactgccttcctggatgctggaaccgatgatgcggtgtcttcacaagat
ggtagtattgtagagggctttagaacaggcctgctttctggtcagaatgtgattgacaac
caatggctgaaaaattatacaggaatccgcagggcgaatattttcctgagtaaaatcgac
gtagtacctactactgcagctttgaaagtgcaatggagagctgaagcgagattccttcgt
gcttatttctatttcgaactgttgaaacgctggggaggagttcccctgttaggcgataaa
gtttatggcctaaacgacaacctcaacctcaaaagaaacacagcagatgaatgctatgat
tatatcctttcagaaattgaagcggtaaaagatttattacttcctgcagttgtggtagat
cagaatatcggacgcgcaaataaaggggcggcattggctttaaaatccagggtattgctg
tatcgcgccagtccgctgtggaaccctaatggagatatacagcgttggactgcggctgca
aatgccgcaaaagacgtgatgacattggggaattacagtctggggaccgattttattgca
ttgttcaatacagtaaagcatagcgagattattttcatgaaagaacaggcgcaaagtcag
acagtagagctgtacaatgggccgattggatatactgagggtactggaaataccagtcct
tcgcagaatctggtagatgcttttctgatgaagaatggcaaactgcctgcagatgcaggt
tcaagttatgatccttcaaacccttatgtcaatagagacaacaggtttgcagccacgatc
atgtacaataccactaaatggttaaacaggccggtggagactttcaacgggggtaaagac
cgtccgggaggcagcagaacgcaaacaaaaacagggtattacctgcgcaagtttatgggc
aagtttgaaagttcgggtacgtatagcaatcagaatcaccatgtgatcctattccgctac
gcagaaatactgttgaactatgcagaagctttgaatgaagcaagcgggccgctcaatgaa
gcagtagatgcgatcattgcgatcaggaaacgtgcaggtgtaagtgctggtgcggataac
cgttatggcatctcagcctctattagtcaggatcagctgcgcatactcatcaggaatgaa
cgacgcattgaaatggcttttgaagagcagcgtttctgggacatcagaaggtggaaaatc
gccggacaggtgatgaacagcccggtaaaaggaatgaacatcgtaaaaaatgcggacgct
acattcagttacaccgtattggatattgcaccttccgtgttcgatatttcgaaaaactac
ctgttcccaatcccttattcagagatccagaccaatccaaatatgactcaaaatccagga
tatacctattaa
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