Pedobacter gandavensis: QG516_20185
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Entry
QG516_20185 CDS
T09013
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
pgj
Pedobacter gandavensis
Pathway
pgj02024
Quorum sensing
pgj03060
Protein export
pgj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
QG516_20185 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QG516_20185 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QG516_20185 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgj02044
]
QG516_20185 (secDF)
Secretion system [BR:
pgj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
QG516_20185 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WGQ08834
LinkDB
All DBs
Position
complement(4805008..4807965)
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AA seq
985 aa
AA seq
DB search
MQGKGFIKFMAILLGIVCVYSLSFNFVTSKVEKDAKAYAKGDLDKEKAYLDSMATVPVYP
VFGFNYQFCKEKEINLGLDLKGGMNVTMEISLAELVKSLAGNPDDANFNKALAIAQEKLN
AGGKDFIAIFVDEFEKLSPNVKLADYFSNQDNAKLLKANASNSDVKNYLSKEATSAIDRS
FVIIRSRIDGFGVVSPNMQKQEGTNRILIEMPGVQDKERVHKLLQGSAELQFWQVYNNEE
VYPVLENINKTLAATLKTTDVAPAGTDTTAAKSESKLAGLAKNKDTKDSAAVKNKDLAKS
NPLFSVLNVPTYQGENGQTSLRPGPVVGWVAQKDTAKVNSYFKRSEVASIIPQSFKFMWS
VKPMDVSTTGGAKIFELYAIKSTSMDGKPDLGGDAISDARHDYDQKGRPEVTMYMTGDGA
TKWKKITAEAAADPNNKKSIAIVLDNTVYSAPTVQNEIPNGISSITGNFTVNDTQDLANI
LKAGKLPAPARIVGEFVVGPSLGEVAIHDGLISFVLAFVVILVFMALYYNKAGWVANLAL
VINLFFIMGILVSLGAVLTLPGIAGIVLVIGLSVDANILIFERVREELTLGKPTPVAIKE
GFKHAMSSIIDSNVTVFVLGAILYIFGTGPVQGFATTLCIGILSSLFCAVLISRLVFDWL
LEKKSNITFGNKYTIHAFKNIAFNFVGHRKIYYSISTAIIVLGFIFYFKNGGLNLGIDFK
GGRTYIVHFDKGMETEDVKAKLAAVFPESETVVKTAGANNELKITTTYHITDQDNGADKL
VEKALQEGLAKTGVPYKIESNEKVGPIIASDIVYGAYGAILFSCLVMFIYIVVRFKKLNY
GLGAVIALFHDVLLVLSFYTILDGVLPFSLEIGQDFIAAILTVMGYTMTETVVVFDRIRE
KLAETGKEDLHGEERNKLINFALNSTLSRTILTSLTVFFVLLVIFIFGGASIRGFIFALL
IGRIIGTYSSLCISTPIVIDLGKNK
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtaaaggttttattaaatttatggcaatacttctaggtattgtctgtgtgtat
tctctctcattcaactttgtcacttcgaaagttgaaaaagacgcaaaggcttatgccaaa
ggagacttagataaggaaaaagcttatttagattctatggccacagtgccggtttatcct
gtttttggatttaactaccagttctgtaaagaaaaagaaattaaccttgggctagacctt
aaaggtgggatgaacgtaacgatggaaatctcgttagcggaactggttaaatctttagct
ggtaatcctgatgatgctaatttcaacaaagcattagcaattgctcaagagaaactaaac
gctggtggaaaagatttcatcgccatatttgtagatgagtttgagaaactttctccaaat
gtgaaattggctgactacttttcaaatcaggacaacgctaaattgcttaaagctaatgcc
agcaattcggatgttaaaaattatttgtctaaagaagcaacaagtgcgatagatcgttct
ttcgtgatcatcagaagccgtatcgatggtttcggtgtggtaagtcctaacatgcagaaa
caagaaggtacgaaccgtatcctgattgagatgccaggtgttcaggataaagaaagggtt
cacaaattattgcaaggatctgcagaattacaattctggcaggtatacaacaatgaggaa
gtgtatccagtattagaaaacatcaacaagactttagctgccactttaaaaactactgat
gtagctccagcaggtactgataccactgccgctaaatcggaaagtaaattggctggtctt
gctaaaaataaagacactaaagattctgcagcggttaaaaacaaagaccttgcaaaatct
aacccattgttctctgtattaaacgtgcctacttaccaaggtgaaaacggtcagacgtca
ttacgtccaggaccagttgtaggttgggtagctcaaaaagatacagctaaagtaaactct
tatttcaaaagatcagaagtagcttctatcattcctcagagtttcaaattcatgtggagt
gtgaaaccaatggacgtttcgacgactggtggtgctaagattttcgaattgtatgcgatc
aaatctacttcaatggatggcaaaccagatttaggtggtgatgcaatcagcgatgcccgt
catgattacgatcagaaaggcagaccagaagtaaccatgtacatgactggtgatggtgct
acgaaatggaaaaaaattactgcagaagcagcagcagatccaaacaacaaaaaatctatt
gcaattgtattagacaacacggtttactctgcaccaactgtacagaacgaaattcctaac
ggtatctcttctatcactggtaacttcactgtaaacgatacacaagatttagccaacatc
ttaaaagcaggtaagcttccagctccagctagaatcgttggtgagttcgtggttggtcct
tctctaggtgaagtagcaatccatgacggtttaatctctttcgtacttgccttcgtggta
atcttagtattcatggctttatattacaataaagcaggatgggtagctaaccttgcgtta
gtgatcaacttattcttcatcatgggtatcctggtttcactaggtgcagtattgaccttg
ccaggtatcgcaggtatcgtattggtaatcggtttatctgtagatgcgaacatcctgatc
ttcgaacgtgtaagagaagagctgaccttaggtaaaccaactccggttgcaatcaaagaa
ggtttcaaacatgcgatgtcttctatcattgactcgaacgttacagtatttgtattaggt
gcgatcctttacatcttcggtactggtccggttcaaggttttgcaacgacactttgtatt
ggtattctttcgtcattattctgtgcggtattgatctcacgtttagtgttcgattggtta
ttagagaaaaaatcaaacattactttcggtaataaatacaccattcacgccttcaaaaac
atcgcgtttaacttcgttggacatagaaaaatctattacagcatttctactgcgatcatc
gtattaggtttcatcttctacttcaaaaatggtggattgaacttaggtatcgactttaaa
ggtggtagaacttatatcgttcacttcgataaaggaatggaaacggaagatgtaaaagca
aaattagcagcggtattccctgagtcggaaactgtagttaaaactgctggtgcaaacaac
gaattgaaaatcaccactacttaccacatcactgatcaagacaatggtgcggataaattg
gtagaaaaagcccttcaggaaggtcttgctaaaacaggtgttccttataaaattgaaagt
aatgagaaggtaggtcctatcattgcaagtgacatcgtttacggagcttacggagcaatc
ctgttctcttgtttagtgatgtttatctatatcgtagtgaggttcaagaaactgaattat
ggtttaggagcggtgatcgcgttattccatgacgtgttattagtactatctttctacacg
attttagacggtgtgcttccattctcattagagattggccaggatttcatcgcggcgatc
ttaacggtaatgggttataccatgacggaaactgtagttgtatttgaccgtatccgtgag
aaattagcggaaaccggaaaagaagacttacatggtgaagaacgtaataaactgatcaac
tttgccctaaacagcacattgagtcgtactattttgacttcattaacggtgttcttcgta
ttacttgtgatcttcatcttcggtggtgcaagtatccgcggatttatcttcgcactattg
atcggtcgtatcatcggtacctactcttcattgtgtatctctacccctatcgttattgat
ttaggtaagaacaaataa
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