Pedobacter gandavensis: QG516_20555
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Entry
QG516_20555 CDS
T09013
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pgj03110
]
QG516_20555 (clpB)
Chaperones and folding catalysts [BR:
pgj03110
]
Heat shock proteins
HSP100
QG516_20555 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
IstB_IS21
NACHT
RuvB_N
AAA_18
AAA_7
Zeta_toxin
AAA_24
ATPase_2
Torsin
DnaB_C
AAA_3
AAA_28
AAA_25
T2SSE
ResIII
DNA_pol3_delta2
NBD_SMAX1
DHOase
TSC22
SOGA
HBM
Motif
Other DBs
NCBI-ProteinID:
WGQ08906
LinkDB
All DBs
Position
complement(4884475..4887069)
Genome browser
AA seq
864 aa
AA seq
DB search
MNFNNFTIKAQEAIQQASEIAQGNQQQAIETAHILKGLLTVDENVVSYILKKLNVNLNVV
NQHLDSQIAKFPKVSGSSPYLTSGSNSAIQKAQSYLKEFKDEFVSVEHLLLGLLSVNDNT
SKVLKDQGVTEKDLKKAIVALRGDNHVTDQNAEATFNALNKYARNLNEYAESGKLDPVIG
RDEEIRRVIQILSRRTKNNPILIGEPGVGKTAIAEGIAHRIIQGDVPTNLKTKTVFSLDM
GALIAGAKYKGEFEERLKAVVKEVTQSDGDIILFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLDEYQKYLEKDKALERRFQKVMVNEPDTQDAISILRGLKEKYETHHK
VRIMDEAIIAAVEMSQRYIADRFLPDKAIDLMDEAASKLRLEMDSVPEEVDELNRKIMQL
EIEREAIKRENDDKKVKSLGEEIANLSAERDQLKAKWQGEKDLVDAINAESEQIEHYKLE
ADQAERAGDYGKVAEIRYGKIKESQDKVEQLKAKLEGQQSESRMLKEEVTADDIAGVVGR
WTGIPVTKLISSEREKLLHLEDELHKRVAGQDEAIEAISDAIRRSRAGLQDKRKPIGSFI
FLGTTGVGKTELAKALAEFLFNDENAMTRIDMSEYQERHAVSRLIGAPPGYVGYDEGGQL
TEAVRRKPYSVVLLDEIEKAHPDVFNILLQVLDDGRLTDNKGRMVNFKNTIIIMTSNIGA
HMIQDNFKNLNEGNREEVIAKTKNELFEILKQTIRPEFLNRIDELIMFTPLNRSEIRNIV
NLQFNHVKETLAEMGIQIEATTEALDWLAELGYDPQFGARPLKRVIQKRILNELSKEILA
GKIDKDSKIKLDMFDNKFVFLNNN
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaataatttcactataaaagcacaggaagcgattcaacaggcttctgaaata
gctcaaggcaaccagcaacaagctattgagacagcgcatatacttaaaggcctgctcact
gttgatgaaaatgtggtttcttatattttaaagaaattaaatgtaaatctaaatgtggta
aatcaacatttggatagccagattgcaaagttccctaaagtgagcggaagtagtccgtat
ttaacttcaggcagtaactccgcaattcaaaaggcgcaatcttatttgaaagagttcaaa
gatgaattcgtttcagtagagcaccttttactgggtttgctgtctgtaaacgacaacact
tctaaggtattaaaggatcaaggggtgactgagaaagaccttaaaaaagccattgtggct
ttgagaggagacaaccatgtcactgatcaaaatgctgaagcaacatttaatgctttaaat
aaatatgcaagaaacctgaatgaatatgcagaatcaggaaagcttgaccctgtaattggt
cgtgatgaagagatccggagagtgatccagattctttccagacgtaccaagaacaatccg
atcctgatcggtgagcctggtgttggtaaaactgccatcgccgagggtattgcccacagg
attattcaaggagatgttcctacgaatctaaagacaaaaacagtattctctttagacatg
ggggcactgattgcaggtgccaagtacaaaggagagtttgaggaacggctaaaagcagtg
gttaaggaggtgactcaaagcgatggagacatcatccttttcattgatgagatccatact
ttggtgggtgccggcggtggagaaggcgcaatggatgcggctaatatcctaaaacctgca
ttggccagaggtgaacttcgcgcaatcggagccaccacccttgatgagtatcaaaaatat
cttgaaaaagataaggccctggaacgccgtttccaaaaggtaatggtgaatgagccggat
actcaggatgcgatttctattctgcgtggactgaaagaaaaatatgaaacccaccacaag
gtgaggataatggacgaggcgattattgccgcggtagagatgtcgcagcgctatattgcc
gaccgtttcttgccggataaagccatcgacttaatggacgaggccgcttctaaactacgt
ttggaaatggacagtgttccggaagaagtagatgaactgaaccgcaagatcatgcagttg
gaaattgaacgtgaggcgatcaaaagggagaatgacgacaagaaagtgaagtctctcggt
gaggaaattgccaatctatctgcggaacgtgatcagctgaaagccaaatggcaaggtgaa
aaagaccttgtagatgcgattaacgcagaaagtgaacaaatagagcattataaactggaa
gcagaccaggcggaacgtgccggagattacggtaaagtagcggaaatccgttatggaaaa
attaaagaatctcaggacaaagttgagcaactgaaagcgaagctggaaggtcagcaatcc
gaaagcagaatgctgaaagaagaagtgaccgctgatgatatcgctggagttgtaggcaga
tggaccggtattccggtgacaaaactgatctccagtgaaagggagaaattgctgcacctg
gaagatgagctgcacaagcgtgtggcgggacaggatgaagcaatcgaagccatttctgat
gcgattcgcaggtcaagagctggattacaggacaaacgcaagccaattggctcattcatc
ttcctgggtactaccggtgtgggtaaaaccgagctggccaaagcattggcagagttctta
tttaacgatgagaatgccatgaccaggattgacatgagtgagtatcaggagcgtcatgcg
gtatccagactgatcggagcgcctccaggatatgtgggttacgatgaaggcggacaatta
acggaagccgttcgtaggaaaccttattcggtagtactgctggatgagattgaaaaagcg
catccggatgtgttcaacatcttgttgcaggtattggatgatggccgtctaacagacaat
aaaggccgcatggtgaactttaaaaacaccatcattatcatgacctccaatattggagca
cacatgattcaggataatttcaaaaacctgaacgaaggaaaccgtgaagaggtgattgcc
aagacgaagaacgaactgttcgaaatcttgaaacaaaccatcagaccggagttcttaaac
aggattgatgaactgatcatgtttaccccgttgaaccgcagcgaaatcagaaacattgtg
aacttacagttcaaccatgtgaaagagacgcttgctgagatgggcatccagatcgaagcg
actacagaagctttagactggttagcagaattaggttatgatcctcaatttggagcgaga
ccgttaaaacgtgtcatccaaaagagaattttaaatgaattgtctaaagagattcttgct
ggaaaaatagacaaagacagtaagattaaattagatatgttcgacaataaattcgtgttt
ttaaacaacaactaa
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