Pedobacter gandavensis: QG516_21280
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Entry
QG516_21280 CDS
T09013
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00270
Cysteine and methionine metabolism
pgj01100
Metabolic pathways
Module
pgj_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
QG516_21280 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgj03000
]
QG516_21280 (dcm)
03032 DNA replication proteins [BR:
pgj03032
]
QG516_21280 (dcm)
03036 Chromosome and associated proteins [BR:
pgj03036
]
QG516_21280 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pgj02048
]
QG516_21280 (dcm)
Enzymes [BR:
pgj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
QG516_21280 (dcm)
Transcription factors [BR:
pgj03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
QG516_21280 (dcm)
DNA replication proteins [BR:
pgj03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
QG516_21280 (dcm)
Chromosome and associated proteins [BR:
pgj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
QG516_21280 (dcm)
Prokaryotic defense system [BR:
pgj02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
QG516_21280 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
WGQ09047
LinkDB
All DBs
Position
5043646..5044686
Genome browser
AA seq
346 aa
AA seq
DB search
MFRHGSLFSGIGGFDIAATWLGWQNVFSCERNPFCQTILKHYWPNTHHYDDIFQFSAAQY
RGHIDIISGGFPCQPFSQAGKRKGKADDRYLFPEACRIIKESRPKWIVLENVAGLFSILE
PDSLSEMEIKAVELFCQDSNLQADSTIIRLQRRVIGSIISEISAAGYVLPQLKDGTPVVC
CIPAAALNAPHQRDRVWFVAHTNSYRDQQYGSYTGAGKRRQTIGEPQKREGKRRSSIFDR
FSGLLHTSNPIETVQTETGEFASLHIGTPDPNFTHRSTDWQHQIPSWEAWPVEPPFCGGD
DGLPSELDGITFSAWRAESVKAYGNAIVPQVALEIFRAIQSIEQKP
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtttagacatggcagcctttttagtggaatcggcggttttgatatcgccgctacatgg
cttggatggcagaatgttttttcctgcgaaaggaatcctttttgccagaccattttaaaa
cattactggccaaacacccatcattatgacgacatctttcaattcagcgcagctcagtat
agaggacacattgacatcatctccgggggatttccctgccagccattcagtcaggccgga
aagcgaaagggcaaagcggatgaccgttatctcttcccagaggcttgcagaattattaaa
gaatcacgacccaagtggattgttcttgaaaacgttgctggcctcttcagcattctcgaa
ccagacagtctttctgaaatggaaattaaagcggttgagcttttttgtcaggacagtaac
ttgcaagcggacagtaccattatcagactccagcgaagagttatcggaagcattatttca
gaaatcagcgcagcaggatatgtattaccgcagcttaaagatggcacaccagtcgtttgt
tgtattccggctgctgcccttaacgccccgcaccagagagaccgggtctggtttgttgcc
cacaccaacagctacagagatcagcaatatgggagttacactggcgcaggtaaaagaagg
cagacaattggcgaaccgcaaaaacgcgaagggaaacggaggtcaagtatctttgacaga
ttttctggtctactacacacttcaaacccaatcgaaacggtacaaacagaaaccggggaa
tttgccagcctccatattggaacgcctgatccgaattttacccaccgcagcacagattgg
caacaccaaattcccagctgggaggcatggccagttgaacccccgttttgtggcggcgat
gatgggcttcccagcgaattggacggaattaccttttcagcatggagagccgaaagtgta
aaagcttacggtaatgcaattgtaccacaagtcgcactagaaatattccgcgctatccag
tccattgagcaaaagccttaa
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