Pedobacter gandavensis: QG516_22340
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Entry
QG516_22340 CDS
T09013
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QG516_22340 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgj01007
]
QG516_22340 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgj03016
]
QG516_22340 (lysS)
Enzymes [BR:
pgj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
QG516_22340 (lysS)
Amino acid related enzymes [BR:
pgj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
QG516_22340 (lysS)
Transfer RNA biogenesis [BR:
pgj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
QG516_22340 (lysS)
Prokaryotic type
Other AARSs
QG516_22340 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Motif
Other DBs
NCBI-ProteinID:
WGQ09257
LinkDB
All DBs
Position
complement(5294806..5296527)
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AA seq
573 aa
AA seq
DB search
MSTGLSEQELLRRNSLNQLRELGIDPYPAEAFEINAHAADILANYERDKTAYKNISIAGR
IMTRRIMGSAAFVELQDSTGRIQVYLKRDELCPDEDKTLYNTVFKKLLDLGDFIGVKGYV
FTTQTGEISVHVTEFKLLSKSLKPLPVVKRDEEGNIYDGFTDPELRYRQRYVDLTVNPGF
KQIFINRSKVINTMRNYFDEQGWMEVETPILQPIHGGAAARPFTTHHNTLDMPLYLRIAN
ELYLKRLIVAGFDGVYEFGKMFRNEGMDRTHNPEFTSMEIYVAYKDYIWMMAMVEDCLEK
ITVAIHGKAEIEVGKHKINFEGPYEKLTMYESIQKYTGIDVSDMTEDQIKEVCKSLNIEV
DASMGRGKLIDELFSEKVEANLIQPTYITDYPLEMTPLAKKHRSKEGLVERFELFVNGKE
IANAYSELNDPIDQKERLIDQLKLAERGDDEAMAMDDDFIRALEYGMPPTSGLGIGIDRL
VMLMTNQSTIQEVLFFPQMRPEKKAKVTTDEDFVKAGIPTEWVPVIRKMNINTIEELKAA
NPNKVFNDLGGMRKKMKLELTMPSKEAVEAWFA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaggactatcagaacaagagttgttgcgtagaaattcgctaaaccaacttcgt
gaattagggatcgatccctaccctgctgaagcatttgaaatcaatgcccatgccgcagat
attttagctaactacgaaagagataagactgcatataagaacattagcattgcaggccgt
atcatgacccgcagaattatgggaagtgctgccttcgtagaattgcaagattcgacagga
agaatacaagtttatttaaaaagagacgagttgtgccctgatgaagataaaaccctatac
aacaccgtattcaagaagttattggatctgggcgactttataggcgtaaaaggctatgtt
ttcactacccagactggtgagatctctgtacacgttacagaatttaaattgttatcaaaa
tccttaaagcctttaccagtagtaaaacgcgatgaggaaggaaatatttacgatggtttt
acggatcctgaattgcgttacagacagcgttatgtggatcttacggtaaaccctggattc
aaacagatattcatcaaccgttcaaaagtcatcaatacgatgagaaactactttgatgaa
caaggatggatggaagtagaaactccgattcttcagcccattcatggtggtgcagcggcg
cgtccatttacgacacaccacaacaccctggatatgcctttatacctgcgtattgcaaat
gagctttacctgaaaaggctaattgtagctggtttcgacggcgtttatgagttcggtaaa
atgttcagaaatgaaggtatggaccgtacccataacccagaattcacctctatggaaatc
tatgtagcttataaagactacatctggatgatggccatggtagaagattgtctggaaaaa
atcacagtggcaattcatggaaaagcagaaattgaagtgggtaaacacaaaatcaatttc
gaaggtccttatgaaaaactaaccatgtacgaatctattcagaaatatactggaatagat
gtatcagacatgacagaggatcagatcaaagaggtttgcaagagtctgaatattgaagta
gatgcttccatgggcagaggaaagctgatcgatgagttgtttagtgagaaagtagaagcc
aacctgatccagccaacttacatcacggattatcctttggaaatgacgccattggctaaa
aaacacagaagtaaagaaggcctggtagaaagatttgagctgtttgtaaatggtaaagaa
attgccaatgcctattcagagctgaacgatcctattgatcagaaagaacgtctgatcgat
caattgaaactggctgaaagaggcgatgatgaagcaatggccatggacgacgattttatt
cgtgcattggaatatggtatgcctccaacctctggtttaggtattggaatcgatagattg
gtcatgttaatgacgaaccagtcgaccatccaggaagttttattcttccctcagatgaga
ccagagaaaaaagcaaaagtaactaccgatgaagatttcgtaaaagctggcatcccgact
gaatgggttccggtgatcagaaagatgaacatcaataccattgaagagttgaaagcagcg
aacccaaacaaggtttttaacgatcttggaggaatgcgcaagaaaatgaagctggaatta
acgatgccttcaaaagaggcagttgaagcttggtttgcttaa
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