Pedobacter gandavensis: QG516_22660
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Entry
QG516_22660 CDS
T09013
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00900
Terpenoid backbone biosynthesis
pgj01100
Metabolic pathways
pgj01110
Biosynthesis of secondary metabolites
Module
pgj_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
QG516_22660
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pgj01006
]
QG516_22660
Enzymes [BR:
pgj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
QG516_22660
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
QG516_22660
2.5.1.29 geranylgeranyl diphosphate synthase
QG516_22660
Prenyltransferases [BR:
pgj01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
QG516_22660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WGQ09321
LinkDB
All DBs
Position
complement(5364320..5365288)
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AA seq
322 aa
AA seq
DB search
MYTPTQLQEIIENAIYKIEYPAHPAKLYEPIRYIMSLGGKRIRPALVLMAADLFDTDIEQ
AIPAALAIETFHNFTLIHDDIMDNAPLRRGQQSVHEKWGVNNAILSGDVMMVESNKHLSM
LASNVLKNALDTFNTTAQGVCEGQQLDMEFEEREVVGIAEYINMIRLKTAVLLGGAMKLG
AQVAGASAEDAAQLYEFGENIGIAFQLQDDILDVYGDPEKFGKQVGGDIIANKKTMLLLK
LKELAEPADLLEMEQQSSNTDFDDKIANMTILYNKYDIRGLASLEMRNYSDKAFQALNAL
AVPEERKKELVLLANQLMNREH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtatactcctacccaattacaagaaattatagaaaatgctatttataagatcgaatac
ccagcacatcctgcaaaactttatgagccgatccgctatatcatgagccttggtggcaaa
agaatcagaccagccttagttttaatggctgctgatttatttgacaccgacattgagcag
gcgatccctgctgcattggccatcgagacctttcataatttcactttaattcatgacgat
attatggacaatgcgccattgcgcagaggtcagcaaagtgttcatgaaaaatggggcgtt
aacaatgccatacttagtggtgatgtcatgatggtagagtccaacaaacacctttctatg
ttagccagcaatgtgctaaaaaacgcattggatacctttaacaccactgcgcaaggtgtt
tgtgaaggtcagcagctcgacatggagtttgaagaacgtgaagtcgtaggcatcgcagaa
tacatcaatatgattcgtttaaaaacagccgttttattaggcggcgcgatgaaacttggt
gctcaggttgcgggtgcaagcgcagaagatgcggcacagctctatgagtttggagaaaac
ataggaattgccttccaattacaggacgacattctggatgtttatggtgacccggagaaa
tttggaaaacaggttggcggcgacattattgccaataagaagaccatgctcctgctgaaa
ctaaaagaactggctgagcctgcagacttactggaaatggagcagcaaagcagcaacact
gatttcgatgataaaatagccaacatgaccattttatacaataagtacgacatcagaggt
ctggccagtctggaaatgagaaactattccgacaaagccttccaagctctaaacgcatta
gcggtccctgaggaacgaaaaaaagaattggtactactagctaatcaattgatgaataga
gagcactaa
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