Pedobacter gandavensis: QG516_23365
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Entry
QG516_23365 CDS
T09013
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pgj
Pedobacter gandavensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA
HTH_8
Mg_chelatase
AAA_3
AAA_22
FleQ
HTH_19
Motif
Other DBs
NCBI-ProteinID:
WGQ09459
LinkDB
All DBs
Position
complement(5531565..5532968)
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AA seq
467 aa
AA seq
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MARLLIIDDERAIRSTLREILEYENYDVEDIDNGVDGLDLIKKKKFDLVLCDIKMNKMDG
MEVLEQAQAYSPDLPFIMISGHGTVETAIEASKKGAFDFISKPPDLNRLLITVRNALDRG
TLVTETKVLKRKASKTRDILGSSESIGKIKETIERVAPTDARVLITGANGSGKELVARWL
HEKSNRADSPLIEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFELANGGTLFLDEI
GDMSLSAQAKVLRALQEHKISRVGGEKELEVNVRVLAATNKDLLKEIEDGNFRMDLYHRL
NVINIHVPHLTERIEDIPEIAQHFLEEICKEYGMPVKKIGDAAMAALQALPWTGNVRELH
NMIERLIILSDKAITEQDVAAFANPGGGTNIGAAHAVTGQQAVRSIAQNYDSFSNFQDYK
DHAEKEFIKFKLEKNNWNVSKTADDIDIQRSHLYSKIEKFGLKRTAE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattattaataattgatgatgaacgcgcaataaggagcacacttcgtgaaatc
ctagagtatgaaaattacgatgtagaagatattgataatggtgttgacggtttagatttg
atcaaaaaaaagaaatttgatctggtattgtgtgacattaaaatgaataaaatggacggt
atggaagtgctggaacaagcacaggcctatagtccggaccttccttttatcatgatttct
ggccacggaaccgtagaaacagcgattgaagcgagtaaaaaaggagcctttgactttatc
tctaaaccaccggatttaaacaggttattaattacggtaagaaatgcgctggacaggggt
actttagtcaccgaaactaaggtcctgaaaagaaaggccagcaagacaagagatatattg
ggtagttctgagagtattggaaaaatcaaggaaactattgagcgcgttgcccctactgat
gcccgtgtattgattaccggcgcaaatggtagtggtaaagaactagttgcaagatggtta
catgaaaaatccaaccgtgcagacagcccattaatcgaagttaactgtgcggctattcct
tcggaactgatcgagagtgaactatttggacatgagaaaggatcctttacttcggctgta
aagcagcgtattggtaaattcgaactggccaatggcgggactttatttctggatgagatt
ggtgacatgagtctttctgctcaggccaaagttttacgtgcgttacaagagcataagatc
agccgtgttggtggagaaaaagaacttgaagtgaacgtaagagtacttgcagcaacgaat
aaagaccttttaaaagaaatcgaagatggcaatttccgtatggatttataccaccgtcta
aacgtcatcaacattcatgtacctcatttaacagaacgtattgaagacattccggagatc
gcacagcacttcctggaggaaatttgtaaagaatacggtatgccggttaaaaagatcggt
gatgcagctatggcggccttacaggctttaccatggacaggaaacgtacgtgagctgcac
aatatgatcgaacgtttaattatcctgagtgataaagctattacagaacaagacgtagct
gcgtttgcgaaccctggcggcggcacaaacatcggagcggcacatgctgttactggtcag
caggcagttcgtagtatagctcagaattatgacagctttagcaatttccaggattataaa
gatcatgcggaaaaggaatttatcaagttcaagttggagaaaaacaactggaacgtgtct
aaaacggcagacgatattgatattcagcgcagtcacctttacagtaagattgaaaaattc
ggactaaaaagaactgcagaataa
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