Pedobacter gandavensis: QG516_23675
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Entry
QG516_23675 CDS
T09013
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pgj
Pedobacter gandavensis
Pathway
pgj00730
Thiamine metabolism
pgj01100
Metabolic pathways
pgj01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
QG516_23675 (thiC)
Enzymes [BR:
pgj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
QG516_23675 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WGQ09517
LinkDB
All DBs
Position
complement(5603180..5605063)
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AA seq
627 aa
AA seq
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MKHEKTPDEQVISRTPFPASKKIFVPGQLHDIQVAMREITLSETKIHNGFGATEVNPPVT
IYDTSGPYTDPNAEIDVKKGLPRLRETWITGRADVDQLDQISSDYGQERLADGKLDNLRF
SHLNKPYRAKKGMNVSQMHYAKKGIITAEMEYIAIRENQRIDLLNEQLGAQYGVMAHQHQ
GHSFGANTPKGYITPEFVRSEVASGRAVIPSNINHPELEPMIIGRNFLVKINANIGNSAV
TSSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNG
KAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRVTGIVSRGGSIMAKWCLA
HHRESFLYTHFEEICEIMKAYDVAFSLGDGLRPGCIADANDEAQFSELETLGELTKIAWK
HDIQTIIEGPGHVPMHLIKENMEKQLEHCSEAPFYTLGPLTTDIAPGYDHITSAIGAAMI
GWFGTAMLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARF
EFRWEDQFNLSLDPDTAKEFHDETLPADGAKIAHFCSMCGPNFCSMKITQDVRDYAAKQG
LEESEALNQGMAEKSKEFTAKGSEIYL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgaaaagactccagacgagcaagtcatcagccgcactccttttccggcctcc
aaaaaaatctttgttccaggacagcttcatgacatccaggtagcgatgcgtgaaatcacg
ttaagtgagactaaaatccacaatggttttggcgccacagaggtcaacccaccggtaacg
atttatgacaccagcggtccttacactgatccgaatgcagaaattgacgtcaaaaaaggt
ttaccaagacttcgggaaacctggatcaccggaagagcagacgtagatcagctggatcag
atttcttctgattatggtcaggagcgactggcagacgggaaactggacaacctccgcttt
tcccatttgaacaaaccctaccgcgcaaaaaaaggcatgaatgtgtctcaaatgcattac
gcgaaaaaaggaatcatcactgccgaaatggaatacatcgccatccgcgaaaatcaaagg
attgaccttttgaatgaacagcttggtgcacaatatggcgtcatggcacaccagcatcaa
ggtcatagttttggcgcaaatacaccaaaaggatacatcaccccggaatttgtcaggtct
gaagtggcttccggcagagccgtgatcccttctaacatcaatcacccggaattagaacca
atgattattggccggaatttcctcgttaagatcaatgccaacatcggaaactctgcagtg
acctcttctatcgaagaagaagtagaaaaggccgtatgggcttgcagatggggcgcagat
acgattatggacctgagtaccggaaaaaacattcatgaaacccgcgaatggatcatccgt
aattcccccgtaccaattggaacggttccgatttatcaggctttagaaaaagtaaatggc
aaagccgaagacctgacctgggaaattttcagagatacactgattgaacaggcagagcaa
ggcgtggattatttcaccatccatgcaggtgtactgcttcgctacattcctttaaccgca
aaaagagtgaccggaattgtttcccgtggtggttcgatcatggcaaaatggtgtctggct
caccatagagaaagtttcttatatactcattttgaagaaatctgtgaaatcatgaaagcc
tatgatgtggccttctctctaggagatggtttacgtccgggctgcattgccgatgcaaat
gatgaagcgcagttttcagaattggaaactttaggagaattgacaaaaatcgcctggaag
cacgacatccaaaccattatcgaaggccctggtcacgtacccatgcacctgatcaaagaa
aacatggagaaacaactggaacattgttctgaggcaccgttctacactttaggtccattg
actacagacatcgcccctggctacgaccacatcacctctgctataggtgcagcaatgatc
ggctggttcggcactgcgatgctttgctatgtgacgccaaaagaacacctgggtttgccg
aacaaaaaagatgtgaaggatggcgtgatcacctacaagatcgcagctcatgctgcagat
ttagccaaaggacaccctggcgcacaataccgggacaatgctttgagcaaggcaagattt
gaattcagatgggaagatcagtttaacctttccctggatccagataccgcaaaagagttt
catgacgaaacccttcctgcggatggtgctaaaatcgcacacttctgctcgatgtgcggc
ccgaacttctgctctatgaaaattacacaggatgtgagggactatgccgctaagcaaggc
ctggaagaatccgaagctttaaatcagggaatggctgaaaaatctaaagagtttacagca
aaaggaagtgaaatttatttataa
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