KEGG   Pedobacter gandavensis: QG516_24100
Entry
QG516_24100       CDS       T09013                                 
Symbol
nrdF
Name
(GenBank) class 1b ribonucleoside-diphosphate reductase subunit beta
  KO
K00526  ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Organism
pgj  Pedobacter gandavensis
Pathway
pgj00230  Purine metabolism
pgj00240  Pyrimidine metabolism
pgj01100  Metabolic pathways
pgj01232  Nucleotide metabolism
Module
pgj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:pgj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    QG516_24100 (nrdF)
   00240 Pyrimidine metabolism
    QG516_24100 (nrdF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgj03400]
    QG516_24100 (nrdF)
Enzymes [BR:pgj01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     QG516_24100 (nrdF)
DNA repair and recombination proteins [BR:pgj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    QG516_24100 (nrdF)
SSDB
Motif
Pfam: Ribonuc_red_sm DurN
Other DBs
NCBI-ProteinID: WGQ09600
LinkDB
Position
5696750..5697733
AA seq 327 aa
MSSYKAVNWNTPENDYAGMFWEQNLRQFWVDTEYIPSKDIDSWKSLSPEIQEAYKKALGG
LTLLDTLQSHTGMPKLLDHIDGLQNKAVLSFMCMMEAIHAKSYSTIFTTVNSTAEINELF
EWVENNKLLQFKASTIDKYYRNLDASKVSDETLFMGLAASVLLESFLFYSGFFMPLWLAG
QGQMVASADIIKKIVADESIHGVFVGLLAQDLYKKLPNPEKSKEELIDLLMELYENELKY
TDELYTEVGLTADVKEYVRYNANKAMMNLGFEELFEVKAVNSIVLNGLNGETTQHDFFSK
KSTNYEKSMEVVHLRDEDFQVAAEPVF
NT seq 984 nt   +upstreamnt  +downstreamnt
atgagttcatataaagcagtaaactggaatacacctgaaaatgattacgcaggaatgttc
tgggagcaaaatcttcgtcagttttgggtggatactgaatatattccttctaaagatatt
gacagctggaagtctttgagccctgaaatccaggaagcttataaaaaagcattgggtggc
cttactttactggataccctgcaaagccataccgggatgcctaaattgttagaccatatc
gacggactgcaaaataaagcagtattgtcctttatgtgtatgatggaggccatccatgcc
aagtcttactctacaatttttactacagtaaatagtactgcagaaatcaatgaactgttt
gaatgggtggaaaataacaagcttttacaatttaaagcttccactattgacaaatattac
agaaacctggatgccagcaaagtaagcgatgaaaccttatttatgggccttgccgcatcg
gtattattggagtccttcttattctacagtgggttctttatgccattgtggttggcagga
caaggtcagatggtagctagtgcagacatcatcaagaaaatcgtagcagatgagtctatt
catggtgtgtttgtaggtttgctggcacaggatctttataaaaaactaccaaatccggaa
aaaagtaaagaagaactgattgatcttttaatggagctttatgaaaatgaattgaagtat
actgatgagttgtataccgaagttgggttgactgcggatgtaaaagaatatgtaagatac
aatgccaataaagcaatgatgaaccttggttttgaagagctgtttgaggtgaaagcagta
aattctattgtattaaatggattgaacggcgaaactacacagcatgatttcttctctaag
aagtcaacaaactatgaaaaaagtatggaagtggtacacctgagagatgaagatttccag
gtagcagctgaaccggttttctaa

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