Pedobacter gandavensis: QG516_26070
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Entry
QG516_26070 CDS
T09013
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pgj
Pedobacter gandavensis
Brite
KEGG Orthology (KO) [BR:
pgj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgj02000
]
QG516_26070
Transporters [BR:
pgj02000
]
Other transporters
Pores ion channels [TC:
1
]
QG516_26070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
SdrD_B
NOMO_3rd
SpaA
Motif
Other DBs
NCBI-ProteinID:
WGQ09983
LinkDB
All DBs
Position
complement(6127565..6130087)
Genome browser
AA seq
840 aa
AA seq
DB search
MKYIYLIFFLCFLSSLSFTHQAKAQERGHIVGLIQDEQGIPASNINIRISTGPIVSGGLV
LPTVPAAPATPGIPNVSSSRKSDQHGAFSFQNLPFGEYQLIFTGVGFQPYTRSVSINEAQ
KEIEMKVTLKSSDDQLQEVVVMGRKKQSYVNTKSFIGSKIESKITEIPQTISVVTKELME
DKQAFIITDVVADLPGVTQFSAYDDLTIRGFRNGNESGFRLVNGLRSGYGYGTSYFRVPL
TLNLESVEILKGPGAALFGDISPGGTVNMNTKKPLEERRHSIAVAAGSFNTIRTMMDLTG
PLDEEKKILYRLNLGHETTNTFRDINARKSFMIAPTFTFRPTENTTINAEINYSNFDGYL
DRGMGIRGGDFYALKRSFTLSQPSDYFKVNDISLNASLNHRINDKLSFNANYMKFIYAEN
LSEHRTLNTFADAPLNTIMNMRYLQKQTKEYTDNVSAYLHYKGGVKDFKHDVVAGLDYVG
YETDKGGHQWEARSQTIDGKVVPLRFDLSNPTYELRNPALYNRLPLAQFFVDYLNSSYQT
TGIFIQNRIRWREKLNILFGLRYENYGDQRKFEGASYEKVKQSVFLPRIGLTYAINQQFN
YFVSYSQGFIPINPQFVRNPENYGRTEPFKSQTSYQVETGLKTEFFNQRLFSSVSFYHIE
RQNMLVNTGQIADNGNPIYRQNGRVKSQGVEFDLKGNLFPFLNISANYAFNLTEVMESDL
KLEKGMMNANAPKHLAAVWAKYTQRDGALKGLGIGLGGQYVGKKRMENTVQNIHSGELEW
NFWPSYFVANAAVYYKLDKMSFSINANNLFDKYYFVGGFDYTRAFPGSPRNLMTAIKYTF
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacatttatttaattttcttcctttgctttttgagcagcctatctttcacccat
caggcaaaggctcaggaaagaggccatattgtaggcttgatccaggatgaacagggcatt
cctgcttcaaacatcaacatccgcatttccaccgggcccattgtttccggtggccttgtg
ttaccaaccgtccctgctgctcctgctacccctggtatccccaacgtttccagctcaaga
aagagcgaccagcatggtgcattctctttccaaaaccttccttttggcgagtaccaactg
atctttaccggggtcggatttcaaccctatacccgctccgtttccatcaatgaagcacaa
aaagaaatcgaaatgaaagtaactttgaaaagttctgacgatcaattacaagaagtcgta
gtcatgggcagaaagaaacaatcatacgtcaatacgaaaagctttatcggctcgaaaata
gagtccaaaatcaccgaaattccacaaaccatttctgtggtgacgaaggagctgatggaa
gataaacaggcttttataattaccgatgtggtagccgatttacctggtgttacacagttc
tctgcttatgatgatttaaccatccgggggtttagaaatggtaatgaaagtggcttccga
ctggtgaatggccttcgttccggatatggctatgggaccagttatttcagggttccttta
acgctcaatctggaaagtgtagaaatcctgaaaggccctggtgcggcattatttggggat
atcagtccggggggaaccgtaaacatgaataccaaaaagccattggaagaacgcagacac
agcattgccgttgctgccgggtcgtttaataccatccgcaccatgatggatctcaccggc
ccgctagacgaggaaaagaaaatcctttaccggttaaacctcggacatgaaaccaccaat
actttccgggacatcaatgcccgtaaatcctttatgatcgcacctactttcaccttcagg
ccgaccgaaaacaccaccatcaatgcggaaattaattacagcaattttgatggttacctg
gacagaggaatgggcatcagaggcggagatttttacgcattgaagcgcagttttacctta
agtcagccgagtgattattttaaggtgaacgacatttccttaaatgcttccctaaaccac
cgcattaacgataaactctctttcaatgccaattacatgaaattcatttatgcggaaaac
ctgtcggaacaccgtaccctgaatacctttgccgatgcgcctttgaataccatcatgaac
atgcgttaccttcaaaagcaaaccaaagaatataccgataatgtatccgcatacctgcat
tacaaaggcggagtaaaagatttcaaacatgatgtggttgctggtctggattatgtaggt
tacgaaaccgataaaggaggtcaccaatgggaagccagaagccagaccatagatggaaaa
gttgtgcctttaaggttcgacctcagcaaccctacttatgaattgagaaatccggcattg
tacaatcgactgcctttagcacagttctttgtggattacctaaattcttcttaccaaacc
accggtatttttatacaaaacagaattcgctggagagaaaaactgaacatcttattcggg
ttgaggtatgaaaactatggagaccagcgtaaatttgaaggggccagttatgaaaaagta
aagcaatccgttttcttaccaaggatcggattgacctatgccatcaaccagcagtttaat
tatttcgtgagctacagccagggcttcatccccatcaaccctcaattcgtccgcaatcca
gagaattatggccgtacagaacctttcaaaagtcagacgagctatcaggtagaaaccggt
ctgaaaaccgagttttttaaccagcgcctcttttcatctgtatcgttctaccacattgaa
cgtcagaatatgctggtcaacaccggacaaattgccgataacggaaacccgatctacaga
caaaatggtagggtaaaatctcaaggtgtcgagtttgacctgaaaggcaacctgttccca
ttcttaaatatcagcgccaactacgcttttaacctgacagaagtgatggaaagtgacctt
aaattggaaaaaggcatgatgaatgccaatgcgccgaaacacctggccgcagtttgggca
aaatacacccaacgcgatggtgccttaaagggcttaggaattggccttggcggacaatat
gtaggcaaaaagagaatggaaaatacggtgcaaaatatccattctggggaattagaatgg
aacttctggccttcttattttgtagcgaatgccgccgtatattacaaattggacaagatg
agtttctccatcaatgccaacaacttgttcgacaaatactattttgttggtggatttgac
tataccagagcatttcccggaagtccgagaaacttgatgactgccataaaatatacgttc
tag
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