KEGG   Peptoniphilus genitalis: M9426_00335
Entry
M9426_00335       CDS       T10321                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pgk  Peptoniphilus genitalis
Pathway
pgk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M9426_00335 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgk03019]
    M9426_00335 (rny)
Messenger RNA biogenesis [BR:pgk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     M9426_00335 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH-I_KHDC4-BBP DUF7557 Herpes_UL25
Other DBs
NCBI-ProteinID: URN41495
LinkDB
Position
complement(67554..69092)
AA seq 512 aa
MGFSSTLISIVIGIIGLAVGYAVRKYISKGKLKNAEELSKKIIYDAENQAQTQKKVLLVE
AKEEIQKLRSEQENEAKIRRAEIKELEDRVLSKEKLLDKKSSQVEKKDEKLSKKLEGLRE
KEEQADELVKQREEELQKVAGLTKEEGKEILLNELKKEITNESALIIKENENRIKEESGK
YARNVIAQAIQRCAADQVAESTVAVVNLPNDEMKGRIIGREGRNIRAIESITGVDLIIDD
TPEAVVLSCFDPIRREIARVALEKLVNDGRIHPTKIEETVEKAKNEVETIIKESGEQAAY
DAGVHGLHPEIIKYLGRLKYRTSYGQNNLKHSVEVAEIAGILAGEIGADVKLAKRGGLLH
DIGKSVDRNLDAPHVDIGVEIARKYHESEFVINAIQSHHGDVEPNCVESVLVQAADAISA
ARPGARRETVESYIQRLEKLEEIANEFDGIEKSYAVQAGREIRIIVKPEKISEAEITITA
REIVKRIESELDFPGQIKVNVIRETRAVEYAK
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgggttttagtagtactttaatatctattgttatcggtattattggcttagctgtaggc
tatgctgttagaaaatatatttctaaaggtaaacttaaaaatgctgaagaattatctaaa
aagataatatacgatgctgaaaatcaagcacaaacacaaaagaaagttttgcttgttgaa
gctaaagaagagattcaaaagttaagatctgagcaagaaaatgaagctaagattagaaga
gctgaaattaaagaattagaggacagagttttatctaaagaaaaactattagataaaaaa
tcttctcaagttgaaaagaaagacgaaaaacttagcaagaaattagaaggcttgagggaa
aaagaagaacaagctgatgaacttgttaaacaaagagaagaggaacttcaaaaagttgct
ggtcttacaaaagaagaaggtaaagaaattcttttgaatgaacttaaaaaagaaataact
aatgaatcggcacttattattaaagaaaatgaaaacaggattaaagaagaatctggcaaa
tatgctagaaatgttattgctcaggctattcaaagatgtgcagctgaccaagttgcagaa
tctactgttgctgtagttaatcttccaaatgatgaaatgaagggaagaattatagggcga
gaaggtagaaatattagagctatagagtcaataacaggagtagatttaattattgatgat
actccagaagcggtagttttatcttgcttcgacccaattagaagagagatagcaagagta
gctctagaaaagcttgttaatgatggtagaattcacccaacaaagattgaagagactgtt
gaaaaagctaaaaacgaagtggaaacgataattaaggaatcaggtgaacaagcagcctat
gatgctggagttcacggcttacatccagaaattattaagtatttaggtagactaaaatac
agaacttcttatggacaaaataaccttaagcattcagtagaagttgctgaaattgctggt
attttagctggtgaaataggcgctgatgttaaacttgctaagaggggtggactacttcac
gacataggaaagtcggttgatagaaatctcgatgctcctcacgttgatattggtgttgaa
attgcaagaaaatatcacgaatcagaatttgttattaatgcaattcaatcccatcatgga
gatgttgaacctaactgtgtagaatccgtcttagttcaagcagcagatgctatatctgca
gctagaccaggagctagacgtgaaacagttgaatcttacatccaaagacttgaaaaactt
gaagaaatcgctaatgaatttgatggaattgagaagtcttatgctgttcaagctggacgt
gaaatacgtataattgtaaaacctgaaaaaatttctgaagcagaaattactattactgct
agagagattgttaaaagaattgagtctgaactagatttccctggacaaattaaagttaat
gtcataagagaaactagagcagttgaatacgcaaaataa

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