Peptoniphilus genitalis: M9426_00335
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Entry
M9426_00335 CDS
T10321
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pgk Peptoniphilus genitalis
Pathway
pgk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9426_00335 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgk03019
]
M9426_00335 (rny)
Messenger RNA biogenesis [BR:
pgk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M9426_00335 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
DUF7557
Herpes_UL25
Motif
Other DBs
NCBI-ProteinID:
URN41495
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All DBs
Position
complement(67554..69092)
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AA seq
512 aa
AA seq
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MGFSSTLISIVIGIIGLAVGYAVRKYISKGKLKNAEELSKKIIYDAENQAQTQKKVLLVE
AKEEIQKLRSEQENEAKIRRAEIKELEDRVLSKEKLLDKKSSQVEKKDEKLSKKLEGLRE
KEEQADELVKQREEELQKVAGLTKEEGKEILLNELKKEITNESALIIKENENRIKEESGK
YARNVIAQAIQRCAADQVAESTVAVVNLPNDEMKGRIIGREGRNIRAIESITGVDLIIDD
TPEAVVLSCFDPIRREIARVALEKLVNDGRIHPTKIEETVEKAKNEVETIIKESGEQAAY
DAGVHGLHPEIIKYLGRLKYRTSYGQNNLKHSVEVAEIAGILAGEIGADVKLAKRGGLLH
DIGKSVDRNLDAPHVDIGVEIARKYHESEFVINAIQSHHGDVEPNCVESVLVQAADAISA
ARPGARRETVESYIQRLEKLEEIANEFDGIEKSYAVQAGREIRIIVKPEKISEAEITITA
REIVKRIESELDFPGQIKVNVIRETRAVEYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggttttagtagtactttaatatctattgttatcggtattattggcttagctgtaggc
tatgctgttagaaaatatatttctaaaggtaaacttaaaaatgctgaagaattatctaaa
aagataatatacgatgctgaaaatcaagcacaaacacaaaagaaagttttgcttgttgaa
gctaaagaagagattcaaaagttaagatctgagcaagaaaatgaagctaagattagaaga
gctgaaattaaagaattagaggacagagttttatctaaagaaaaactattagataaaaaa
tcttctcaagttgaaaagaaagacgaaaaacttagcaagaaattagaaggcttgagggaa
aaagaagaacaagctgatgaacttgttaaacaaagagaagaggaacttcaaaaagttgct
ggtcttacaaaagaagaaggtaaagaaattcttttgaatgaacttaaaaaagaaataact
aatgaatcggcacttattattaaagaaaatgaaaacaggattaaagaagaatctggcaaa
tatgctagaaatgttattgctcaggctattcaaagatgtgcagctgaccaagttgcagaa
tctactgttgctgtagttaatcttccaaatgatgaaatgaagggaagaattatagggcga
gaaggtagaaatattagagctatagagtcaataacaggagtagatttaattattgatgat
actccagaagcggtagttttatcttgcttcgacccaattagaagagagatagcaagagta
gctctagaaaagcttgttaatgatggtagaattcacccaacaaagattgaagagactgtt
gaaaaagctaaaaacgaagtggaaacgataattaaggaatcaggtgaacaagcagcctat
gatgctggagttcacggcttacatccagaaattattaagtatttaggtagactaaaatac
agaacttcttatggacaaaataaccttaagcattcagtagaagttgctgaaattgctggt
attttagctggtgaaataggcgctgatgttaaacttgctaagaggggtggactacttcac
gacataggaaagtcggttgatagaaatctcgatgctcctcacgttgatattggtgttgaa
attgcaagaaaatatcacgaatcagaatttgttattaatgcaattcaatcccatcatgga
gatgttgaacctaactgtgtagaatccgtcttagttcaagcagcagatgctatatctgca
gctagaccaggagctagacgtgaaacagttgaatcttacatccaaagacttgaaaaactt
gaagaaatcgctaatgaatttgatggaattgagaagtcttatgctgttcaagctggacgt
gaaatacgtataattgtaaaacctgaaaaaatttctgaagcagaaattactattactgct
agagagattgttaaaagaattgagtctgaactagatttccctggacaaattaaagttaat
gtcataagagaaactagagcagttgaatacgcaaaataa
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