Peptoniphilus genitalis: M9426_01535
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Entry
M9426_01535 CDS
T10321
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pgk Peptoniphilus genitalis
Pathway
pgk03030
DNA replication
pgk03410
Base excision repair
pgk03420
Nucleotide excision repair
pgk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M9426_01535 (polA)
03410 Base excision repair
M9426_01535 (polA)
03420 Nucleotide excision repair
M9426_01535 (polA)
03440 Homologous recombination
M9426_01535 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgk03032
]
M9426_01535 (polA)
03400 DNA repair and recombination proteins [BR:
pgk03400
]
M9426_01535 (polA)
Enzymes [BR:
pgk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M9426_01535 (polA)
DNA replication proteins [BR:
pgk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M9426_01535 (polA)
DNA repair and recombination proteins [BR:
pgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M9426_01535 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9426_01535 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
AvrB_AvrC
TcdB_toxin_midC
UBA_9
Motif
Other DBs
NCBI-ProteinID:
URN41712
LinkDB
All DBs
Position
complement(310592..313249)
Genome browser
AA seq
885 aa
AA seq
DB search
MDNKFLIIDGSSLFFRAFYALPLLKTKRGLYTNAIYGFVMMVENAIEKVKPTHLAVCFDM
KGKTFRSEIYKDYKGTRQKTPNELEQQWPLVREILDHMNVKILESPVYEADDIAGTLSKL
GTEEGFENYLLTGDKDYFQLVNEKTKVLFTRKGITDMDIMTVEKIKEDYGIEPLEFIELK
ALMGDSSDNIPGIYGIGEKTGLKLIHEFHTIENLYDNIDDVSGKKLKEKLIDGKMSAFMS
KKLGTIVKDVPLEESLDDFKKVDYDYEKLSELYREFEFNSMLDRLPEKYRKEEVEEISQD
NFEFVEIKDLKEIEKDLKDKKSLAFKFITDGKIYEDVKPIYLAVKVKDSEVKFISYEDID
FDFLKKIMEDEKVEKLGYSLKEDIIILMDLGIDIKNYSHDVEIAEYLLNSTQSDYDINKI
SMAYFKNGYLDLEDLLGKGAKKKTYTDLDKDDLFKYFAFVLNTIYRLEDLQKEKIDEEEM
TSLYQDMELPLVEVLASMEYVGINTDEAVLDEIDKQIIEKLKTLEEEIYEEAGEEFNINS
PKQLGVILFDKMDFPVIKKTKTGYSTSADVLEKLRGKGEIIDKILDYRKFSKLKSTYIDG
LKAVINKKTKRIHSRFMQTVTATGRISSTDPNLQNIPIKTEEGRLIRKAFLASEGGVLVD
ADYSQIELRVLAALSDDKEMLDAFKHGLDIHRKTASEVFHVDYDDVDDRQRYEAKAVNFG
IVYGISDYGLSQNLNIPRKAAKEYIDNYLGHFVGIKNYMAEEIKNGKDKGYVETIFKRRR
YIPELNAKNFNIRSFGERIALNTPIQGSAADIIKIAMVKVYNELKKRNLKSKLIIQIHDE
LVVDTAEDEIEEVKELMKDLMENSVDLNVKLSVDMNTGANLYESK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggataacaaatttttaattatagatggaagttcccttttcttcagggccttttatgcc
ctaccacttcttaagactaagaggggactttatacaaatgcaatttatggctttgtcatg
atggtggaaaatgccattgagaaggtaaagccaactcaccttgcagtttgctttgacatg
aaggggaagacttttaggtcagagatttacaaggactacaagggaactagacaaaagact
cccaacgagttggaacaacaatggccacttgtgcgtgaaatcttagaccacatgaatgtg
aagattcttgagtcaccagtttatgaagctgacgacattgctggcactctttcaaagctt
ggtactgaagaaggttttgaaaactatcttttgacaggggacaaggactattttcaactt
gtaaatgaaaagactaaagtcctcttcactcgcaagggtatcactgacatggacatcatg
acagtggaaaagataaaagaagattatggaattgagcctcttgaattcattgagctaaag
gctcttatgggtgactcttctgacaacattccagggatttatgggattggagaaaagact
ggcctcaaattaattcatgagttccacactattgaaaatctttatgacaatattgatgat
gtttctggcaagaagttaaaggaaaaattaattgacgggaagatgtctgccttcatgagt
aagaagctgggaacaattgtaaaggatgttcctcttgaagaaagtcttgatgacttcaaa
aaagtagattatgactatgaaaagttatcagaactttatcgtgagtttgagtttaactcc
atgttagacaggcttccagaaaaatatcgcaaggaagaagtggaggaaatctcccaagac
aactttgaatttgttgaaataaaagacctaaaggaaattgaaaaagatttaaaggacaag
aagtcccttgcctttaaatttattacagatggaaagatttatgaagatgttaagcctatc
tatcttgcagttaaggtcaaggattctgaagttaagtttatttcttatgaggacatagac
tttgatttcttgaagaagattatggaagatgaaaaagtcgaaaaacttggctattcactg
aaagaagacataatcatcctaatggaccttgggattgacatcaaaaattattcccacgac
gttgaaattgcagaatatttattaaattctactcaatcagactatgacattaataaaatt
tccatggcttactttaaaaatggttacctggaccttgaagacctacttggcaagggtgca
aagaagaaaacttacactgacttagacaaggatgacctctttaagtattttgcctttgtt
ctaaatacaatttacaggttggaagaccttcaaaaggaaaaaattgatgaagaagagatg
acttctctctaccaagatatggagctacctcttgttgaagtccttgcatcaatggaatat
gtgggaatcaacaccgacgaggccgtcctagatgaaattgacaagcaaattattgaaaaa
ttaaagactttggaagaggaaatttatgaagaagctggagaagaattcaacataaattcg
ccaaagcaattgggagtaatcttatttgacaagatggacttcccagttatcaaaaaaaca
aagactggttactcaacttctgccgacgtattggaaaagttacgtggcaagggcgagata
atcgacaagattttggattacaggaagttctccaagttgaagtcaacttatattgacggc
ttaaaggctgtcataaacaagaaaactaagaggattcactcaaggtttatgcaaacagtt
actgcaactggaaggatttcttcaacggatccaaacctacaaaatattccaataaaaacc
gaagaaggacgacttataagaaaggccttcttggcatcagaaggtggagtcctagttgat
gccgactactcacaaattgaattaagagtcttagctgccctctcagatgacaaggagatg
cttgatgcctttaagcatggacttgatatccataggaagactgcatcagaagtctttcat
gtagattatgatgatgttgacgaccgtcaaagatatgaagccaaggcagtaaactttgga
attgtatatgggatttctgattacggactttcacaaaatttaaatataccaaggaaggct
gccaaggaatatattgacaactaccttggtcacttcgttggaataaaaaattatatggca
gaagaaattaaaaatggcaaggacaagggctatgtggaaaccatcttcaagagaaggaga
tacatcccagaactaaatgccaagaacttcaacataagaagctttggggagaggattgct
cttaacacacctatccaagggtcagctgccgatatcataaaaattgccatggtgaaagtt
tacaatgaacttaaaaagaggaatttaaaatcaaaattaattattcaaatccatgacgaa
cttgttgtggacacagcagaagatgagatagaagaagtgaaggaacttatgaaggaccta
atggaaaactctgtggacttaaacgtaaaattatccgtggacatgaacactggggcaaat
ctctatgagtcaaaataa
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