Peptoniphilus genitalis: M9426_01775
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Entry
M9426_01775 CDS
T10321
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgk Peptoniphilus genitalis
Pathway
pgk03420
Nucleotide excision repair
pgk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M9426_01775
03430 Mismatch repair
M9426_01775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgk03400
]
M9426_01775
Enzymes [BR:
pgk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9426_01775
DNA repair and recombination proteins [BR:
pgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9426_01775
MMR (mismatch excision repair)
Other MMR factors
M9426_01775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
URN41757
LinkDB
All DBs
Position
complement(364264..366123)
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AA seq
619 aa
AA seq
DB search
MNLTPSQLKAVDHFEGPAIVLAVPGAGKTTMILHRTKKLIERGVDPKSILTITFSKAQAV
DIKDRFVGMDGNRTVHFSTIHAFCYSIVRDYSKKSGKSLSLIDSNMKKKYEILRDIYRSV
NNSYPTEERIETAISEVGYCKNMMLSPQSFAKSKRCDTDNFVKFFETYEKFKKDRGLIDF
DDMINLSYDVLKNDPAIMKKYRDRFKFIQLDEGQDTSRSQFMVLKLLAKPNNNLFVVADD
DQSIYGFRGANTEELFKLKDEYKDIKTFYMEDNFRSTKNIVNIANIFIGQNEKRFEKTLV
TDNPFDKPVSIIKVKEPKDQYALIEEELKKEDGDIAVLYRNNLSSIGLVEYFERKNYEFN
IKDKKTKFFSHFITRDILDILNFAGDLSDIDLYEKFYFKLKGYISKRHIEYLKRHRGKNI
FNILKDYPDLPSYYNKNINGLLGGFKKIARVDVYEAIDYIDKEMGYGDYLRENAKRFMET
EATLNEYLYYLKMIAKSTKSLDLFIGRLKELEYDLLKARDTDARLTFSTIHSAKGLEFSR
VFVVDLYEGTLPSTSSIEGLREDPDLYEEERRLFYVAMTRAKRELYLMYSHYTNGKKNEI
SSFVTDLETLAGGNSEHNR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttaacaccaagtcaattaaaagctgtagaccactttgagggtcctgccattgtt
ttggcagttcctggtgcaggaaagactactatgattttgcacaggaccaaaaagttaata
gagaggggagtggaccccaagagcatcttaacaattactttttccaaggctcaagctgtg
gacataaaggatcgttttgtaggaatggacggcaacaggactgttcacttctccaccatc
cacgccttttgctattcaattgtaagggactattccaaaaagtctggaaagtctcttagt
cttattgattcaaatatgaaaaagaagtacgagatccttagagacatctacaggtcagtt
aataattcctatcccacagaagaacgaatagaaactgcgatttcagaagttggttattgc
aagaatatgatgttgtcgccccagtcttttgccaagtccaagaggtgtgacacagataat
tttgtcaagttctttgagacctatgaaaagtttaagaaggacaggggacttatagatttt
gacgacatgataaatctttcctacgatgtcttaaagaatgaccctgcaataatgaagaag
tacagggacaggtttaagttcatccaacttgatgagggtcaggacacttctaggagtcag
tttatggttttgaaactccttgccaagcctaacaataatttatttgtcgttgccgatgac
gaccaatctatttatggctttaggggagccaacactgaagaactttttaaactcaaagat
gaatacaaggacataaagaccttttatatggaagacaactttcgttccactaaaaacata
gtaaacattgcaaatatttttattgggcagaatgagaagaggtttgaaaaaactctcgta
acagacaacccctttgacaaacctgtaagtattattaaggtcaaggagcccaaagaccag
tacgccctaatagaagaagagttaaaaaaagaagatggagacattgcagtcctctaccgt
aacaacctttcaagcattggccttgtggagtactttgagagaaaaaattatgaatttaat
ataaaggacaagaagaccaagtttttctcccactttataactcgggacatcttggatatt
ttaaactttgctggggacctttcagacattgacctctatgaaaaattttattttaaatta
aagggttatatttcaaagagacatattgaatacctaaagagacacagagggaaaaatatc
tttaacatcttaaaggattatccagatcttccatcttattacaacaagaatataaatggg
ctcttgggtggttttaaaaagattgcaagggtagacgtctatgaggccatagattatatt
gacaaggaaatgggctatggcgactatcttagagaaaatgccaagaggtttatggaaacg
gaagcaactttaaatgaatacctctactacttaaagatgattgccaagtcgactaagtcc
ttggacctattcattggcaggctcaaggaattggaatacgacctcttaaaggctagagat
actgatgcaaggcttaccttctccactatccattcagccaagggacttgaattctcaaga
gtttttgttgtagacttgtatgaggggaccttgccatcaacatcgagcattgagggccta
agagaagatccagacctttacgaagaggagagaagactcttttatgtagccatgactagg
gcgaagagggaactatacctcatgtactcccactacacaaatggaaagaaaaatgaaatt
tcttcctttgttacagacttagagactttagcaggaggaaacagtgaacataatagatga
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