Peptoniphilus genitalis: M9426_08285
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Entry
M9426_08285 CDS
T10321
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pgk Peptoniphilus genitalis
Pathway
pgk03410
Base excision repair
pgk03430
Mismatch repair
pgk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M9426_08285 (recJ)
03430 Mismatch repair
M9426_08285 (recJ)
03440 Homologous recombination
M9426_08285 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgk03400
]
M9426_08285 (recJ)
DNA repair and recombination proteins [BR:
pgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M9426_08285 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M9426_08285 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M9426_08285 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7658
Motif
Other DBs
NCBI-ProteinID:
URN41249
UniProt:
A0ABY4TLB1
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All DBs
Position
1731888..1733678
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AA seq
596 aa
AA seq
DB search
MERWFIKNKSDPGIDYKKLGINNVIYKILLNREINTEEDIREFLEPSLSNLNSPILLKDM
VKASNIILSHLAKKNKIRIIGDYDVDGVTSTYILYEGLRTIGGDVSYDIPHRVKDGYGIN
KNLIDKANEDGVKCIITCDNGIAARDAVDYAMSLDIDVVVTDHHEVPKIIKDGNEVEIIP
EASAVIDPKQDACSYPFKEICGGVVAFKLIEYLFLIKGVDKEEFYEKFLPYAAIATVCDV
MPLTNENRVIVSEGIKILRKSKDLGLNALIEAADIKKDDIDVYHLGFILGPTINSSGRLE
SAKEALELFLEKDYSIALEKAKELRDLNYERQKLTSDAFEVIDEKIQKEGLLDKHKVLIV
YEEGLNESILGIVAGKIKEKYYRPSVVLSDSKDLIKGSGRSIEEYNMFQEFSKSKEYLRS
FGGHKMACGLALPLENLDDFIRDVDQKESLTRHDLIRKIYIDGNLELKYISMKLVQDIEA
LAPFGNGNSAPKFGAKNLQIKSLNILGKNKNFLKMTLSQDNINYTGILFEDSKVFLNKLA
SSYGREEVMGLLNGRPSNIFIDIVFNLDLNKFNGNVTIQLKIKSYRITGEKNVINR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatggtttataaaaaacaaaagtgatcctggaatcgactataaaaaattaggg
ataaacaatgtcatatataaaattttactcaatagggaaataaatactgaagaagacatt
cgagagtttttagagccaagtctttcaaatttaaattcgcctattttgttaaaggacatg
gtcaaggcttcaaatataattttaagtcacttggctaagaaaaataaaattagaattatt
ggagactatgatgttgacggtgtaacatcaacttatatcttgtatgaaggcttaaggact
attggtggagatgtctcttatgacatacctcatagagttaaagatggctatggaatcaac
aaaaatttaattgacaaggctaatgaagatggtgtcaagtgcattataacttgtgacaat
ggaatagctgcaagagatgcagttgattatgccatgtctttagatattgatgtagttgta
actgaccatcatgaggtgccgaaaattattaaagatggaaatgaagttgagattatacca
gaggcaagtgcagttatagatccaaaacaggatgcttgctcttatccctttaaggaaatt
tgcggaggggtagttgcctttaaactcatagagtatctttttttgatcaagggagtagac
aaggaagagttttatgaaaaattcttgccctatgctgccatagctactgtatgtgatgta
atgccacttacaaatgaaaatagggttatagtttctgagggaattaagatcttaaggaaa
agcaaagatttgggccttaatgccttaatagaggcagccgatataaaaaaagatgatatt
gatgtttaccatcttggttttatccttggaccaactattaattccagtggaaggcttgaa
tctgctaaagaagccctagaattatttttggaaaaggactattctattgctcttgaaaaa
gccaaagaattaagagacctaaattatgaaagacaaaagctaactagtgatgcctttgaa
gtaatagatgagaagatacagaaagaaggattgctagataagcataaggtcctaatagtt
tatgaggaaggcttaaatgaatccattcttggtattgttgctggaaaaatcaaagaaaag
tattacaggccaagcgtagttctaagtgattccaaggacttaattaagggatctggaaga
agtattgaagaatataatatgttccaagaattttctaaatctaaggaatacctgaggagc
tttggtggtcacaagatggcctgcggactagctcttcccctagaaaatctagatgacttt
attagggatgtagaccaaaaagagagcttaacaaggcacgacttaataagaaagatttat
attgatggaaatttagagctcaaatacattagcatgaagcttgtccaggacatagaggct
ctggctccctttggaaatggaaactctgcgccgaagtttggtgctaaaaacttacagata
aagtcacttaatatcttgggtaaaaataaaaactttttaaagatgactttatcccaagat
aatataaattacacaggaatattatttgaagattcaaaagtatttttaaataagcttgct
agttcctatggcagggaagaagttatgggtcttttaaatggaagaccttcaaatatattt
atagatatagtttttaatcttgacttaaataaatttaatggaaatgttactattcagcta
aagataaaaagctatagaatcacaggtgagaagaatgttattaatagatga
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