Phaeobacter inhibens 2.10: PGA2_239p0530
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Entry
PGA2_239p0530 CDS
T02193
Name
(GenBank) DNA topoisomerase 1B-like protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pgl
Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgl03032
]
PGA2_239p0530
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_239p0530
Enzymes [BR:
pgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PGA2_239p0530
DNA replication proteins [BR:
pgl03032
]
Prokaryotic type
DNA Topoisomerases
PGA2_239p0530
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PGA2_239p0530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
THDPS_N_2
PWI
Motif
Other DBs
NCBI-ProteinID:
AFO89480
LinkDB
All DBs
Position
pPGA2_239:complement(61202..62179)
Genome browser
AA seq
325 aa
AA seq
DB search
MKLVYYTDDQPGITRRRRGRGFSYYMPDGSHIGNATERARLNGLGVPPAYTDVWLCPLIN
GHLQATGRDARNRKQYRYHPEWQARRAEQKFAHLVAFGESLPALRRWISDRLTGTVGDED
TAIAAVLALLDRGSLRIGNPRYTEKNGSYGATTLRPRHVVFSGQAIQLTYTAKGGQTVEK
SLRGPALQRILERSQDLAGPELISWVDDNDDVRAVRSEQVQEVLAKLCGDEVSAKTLRTW
NGSHAAFAAALDAPTLTITAMAEAAAERLHNTPTIARNSYIHPQIIGLADLPDRQRVAQL
SALPQRQVNGLRLGEGRLIDFLNAN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtctattacacggatgatcagcccggtattacccgccgccgtcgaggccgc
gggttttcctattacatgcccgacggcagtcatatcggcaatgcgacggaacgggcccgg
ctgaatgggttgggtgtcccgcctgcatatacagatgtctggttgtgcccattgatcaac
ggccaccttcaagccactgggcgcgacgcccgcaatcggaaacaatatcgctatcatcca
gaatggcaggcgcgccgggccgaacagaaatttgctcatctcgttgccttcggggaaagc
ctaccggcgttgcgccgctggatcagcgacaggctgaccggcactgtgggcgacgaagac
accgccatcgcagccgtactcgcccttttggatcgcggctctctcagaattggaaacccc
cgctacaccgagaagaacggcagctacggcgccaccacgttgcgcccgcgtcatgtcgtt
ttttcgggtcaggcgatacagctgacatatacggcaaagggcggccagacagtggagaag
tcactgcgggggcctgcgctgcaacgcatcctcgaacgctcacaggatctggccggcccc
gaactgatctcttgggtcgacgacaacgatgatgttcgtgccgtccgctcggagcaggtg
caggaggttttggccaaactatgcggcgatgaggtctccgccaagaccctgcgcacctgg
aacggcagccacgccgcattcgccgccgctcttgatgccccaaccctgaccatcaccgcg
atggccgaggccgcagcagaacggctgcacaacaccccaaccatcgcccgtaacagctat
atccatccgcagatcatcggattagccgacctgcctgaccgtcaacgcgtggcacagctg
agcgcgttgccgcagcgacaagtcaacgggctacgtctgggtgagggcaggttgatcgac
tttctgaatgccaattga
DBGET
integrated database retrieval system
