Phaeobacter inhibens 2.10: PGA2_239p0560
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Entry
PGA2_239p0560 CDS
T02193
Name
(GenBank) uracil DNA glycosylase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGA2_239p0560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_239p0560
Enzymes [BR:
pgl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PGA2_239p0560
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGA2_239p0560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AFO89483
LinkDB
All DBs
Position
pPGA2_239:65059..66504
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AA seq
481 aa
AA seq
DB search
MYHAEMPVIGTAEAWRCAARGFLAQGIPPEAILWNSDGTAPDLFASQARPPPNGDIHVPR
GFVALADKVVWHSDPSRFSRLYALLWRLRAERGLMSDRGDADLARLRQMEKAVSRCQHKM
KAFVRFRELGNADAPRRSFAAWFEPTHYTVEPTATFFARRFADMDWRILTPDVAAIFEGG
ELRFEPGHPRPELPQDASEQLWITYFRNIFNPARLKVQAMQSEMPKKYWKNMPEAAAIPE
LIATAPARARAMAEAAPTLPPLRAARVQARLPEANPHWQGPAAELPAAINSCTLCPLYGP
ATQAVPGEGPTDADLMIVGEQPGDQEDLVGRPFVGPAGQLFDQLATEAGLPREAAYVTNA
VKHFKFLPRGRKRLHQQPNGSEIRHCQVWLRAELDQVRPKLILALGATAAEALLGSGKHI
LQRRGTIERRVDGTPVLITLHPSYLLRVPDRYLRERATEDLRADLRLAADWLVQRETLIE
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtaccatgctgaaatgcctgtgatcggcacagcggaggcctggcgctgcgccgcgcgg
gggtttctggcgcagggtattccgcctgaggcaatcctctggaacagcgacggcacggcg
ccggatctgtttgcctcacaggcccgacccccgcccaatggcgacatccatgtgccgcgc
ggctttgtcgccctggcggacaaggtggtctggcacagtgatccgagccggttctcccgg
ctctatgcgttgctgtggcggctgcgggcagagcgtggtctgatgagtgatcgcggtgat
gcggatttggcccggttgcggcagatggaaaaagctgtgtcgcggtgccagcacaagatg
aaagccttcgtccggtttcgtgagttgggcaatgccgatgcgccgcgacggtctttcgcg
gcgtggtttgagccgacacattacacggtggagccgacagcgacattcttcgcccggcgc
tttgccgatatggactggcgtattctgacgccggatgttgcagcgatatttgagggtggc
gagctgcggtttgaacccggacacccccggcctgaactgccgcaggatgccagcgaacag
ctctggatcacctatttccgcaatattttcaatccagcgcggctgaaagttcaggccatg
cagtcggagatgcccaagaaatactggaagaatatgcccgaggccgccgccattccggag
ttgattgccacagcccctgccagggcgcgcgcgatggcggaagcggcacctaccttgcca
ccgctgcgcgctgcacgcgtgcaggcccgattgcctgaggcaaacccccattggcaggga
ccagcagctgaattgccagccgcaatcaacagttgcacactctgcccattgtatggccca
gccacccaggcagttcccggcgaagggccgacagatgcggatctgatgattgttggcgaa
cagcctggtgaccaggaggatctggtggggcggccatttgtgggccctgccggacagcta
tttgatcaattggcaactgaagccgggctcccgcgggaggcggcctatgtaaccaatgcg
gtgaaacactttaagtttctgccgagggggcgcaaaaggctgcatcaacagccaaatgga
tcggaaatccgccattgccaggtctggctccgggcagaactggatcaggttcgaccaaag
ctgatccttgcgcttggcgcgacagcggcggaggcattgctggggtcaggcaagcatatc
ctgcagcggcgtgggacgattgagcgccgcgttgacgggacgccggttttgatcactttg
catccatcttatctgcttcgggtgcctgatcgctatctgcgcgagcgtgcgacggaggat
ctgcgggcagacctgcggttggcggcagattggttggttcagcgcgagaccttgattgag
ccttga
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