Phaeobacter inhibens 2.10: PGA2_239p0860
Help
Entry
PGA2_239p0860 CDS
T02193
Name
(GenBank) ABC transporter, extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGA2_239p0860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pgl02000
]
PGA2_239p0860
Transporters [BR:
pgl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PGA2_239p0860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6921
Motif
Other DBs
NCBI-ProteinID:
AFO89513
LinkDB
All DBs
Position
pPGA2_239:96968..98569
Genome browser
AA seq
533 aa
AA seq
DB search
MSFVHRFIRPRFLAHAAAAGLALGAAQYFGLGAEALIAAEPDRQRPLVITDSKGDRGMLA
PYVHRKNGIAYLYTSYIFDTLVSQDADGNSVPGLARTWTRSQDGLSYALELQRDAKWHDG
TPVTADDVAFTLRYMAEHPYVFGSVKALAGVEVEGVHDLRIHIKRAEYGLVEGLFSAIPI
LPRHIYEGVKDPFRFATPEAAVGSGPYRLAAYDKAQGRYRLEATEDHPLGRPRFDQIWIV
KMGPDAALQAMSAGEVDVISYLPPDRLPEALSAGFAVETSPSDHVLRLGFNHRGQFQKKE
LRQAIAYVVDRSALLEIAFPGVAELAETGYFQPGSKWQSDEATEGYAYDPAQARDLLLAA
GWTQNSAGRWQTQGEEIRLRLLTDGREVKPARVIAEQLEAFGFAVDLRVMEVAALRSLVA
DGDYDLTLFSSSTLGDPGNIRRRVFGRGWNSDRFPADPKMAGLIKAQAVAQGQAERQEIL
ARFQQLYAENLPSYMLVNPLMATVFNDKLSAPFMPGGVAIGIPSALHKSIFLE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgttcaccggtttattcgccctcgtttccttgcccatgctgcggctgccgga
ctggcgcttggcgctgcgcagtattttggtttgggtgctgaggcgctcatagcggcagaa
ccggatcgccagaggccgttggtgatcactgacagcaagggcgaccgtggcatgcttgcg
ccttatgtccatcgcaaaaacgggatcgcctatctttataccagctacatctttgatacg
cttgtcagccaggatgcagatggcaattcggtgccggggctggcgcggacttggacgcga
tctcaggacggtttgagttacgctttggaactgcaacgggatgcgaaatggcatgacgga
accccggtcaccgcagatgatgtcgcctttactctgcgctatatggctgaacatccttat
gtttttggatctgtcaaagcgcttgccggggttgaggtcgagggcgtgcatgatctgcgc
atccatatcaaacgcgcggaatacggcttggtcgagggtttgttttccgcaattcctatc
ctgccacgtcatatctatgagggcgtgaaagatccttttcgatttgccacgccggaagcc
gcagttggcagtggcccctatcgattggccgcctacgacaaggcgcagggacgttaccgt
ttggaagcgacggaagatcaccctctcgggcggccacggtttgaccagatctggattgta
aagatgggtccagatgccgcccttcaggcgatgagcgccggagaggtggacgtgatttca
tacctccccccggatcgccttcctgaggctttgagcgctggctttgctgtcgaaacctcg
ccaagtgaccatgtgttgcggctgggcttcaatcatcgtggacagtttcaaaagaaagaa
ttgcgccaagccattgcctatgttgttgatcgttctgcgttgctggaaattgcatttccc
ggggtcgctgagcttgctgagacaggctactttcagcccggctccaagtggcaaagtgac
gaggcaacggagggttacgcctacgacccggctcaggcgcgcgacctgttattggctgca
gggtggacccagaacagcgctggccgctggcaaacgcagggggaggaaatccgcctgcgg
ctcctcacggatggtcgtgaggtgaaacccgccagagtgatcgctgaacagttggaagcg
tttggatttgcggttgatcttcgggtcatggaggtcgccgcgctgcgcagtctggtggct
gacggcgactatgatctgacgttgttctcatccagcacgttgggcgatccgggcaatatc
cggcgcagggtcttcgggcgcggctggaacagcgaccgtttccctgcggaccctaagatg
gcaggcctgatcaaggcgcaggccgttgctcagggtcaggccgaacgacaggagatactg
gccagatttcagcagctttatgcagagaaccttccgtcctacatgttggtcaacccgctg
atggcaaccgtattcaatgacaaactgtcggcaccgttcatgccgggcggggtggccatt
ggcattccgtcagcgcttcacaaatccatattcctggagtga
DBGET
integrated database retrieval system
