Phaeobacter inhibens 2.10: PGA2_239p0980
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Entry
PGA2_239p0980 CDS
T02193
Name
(GenBank) transcriptional regulator, LysR family
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
pgl
Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgl03000
]
PGA2_239p0980
Transcription factors [BR:
pgl03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PGA2_239p0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
TetR_C_7
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AFO89525
LinkDB
All DBs
Position
pPGA2_239:complement(108728..109651)
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AA seq
307 aa
AA seq
DB search
MDIIWLRDFEALTTHKNFSRAAEERNVSQPAFSRRIRALEDEVGVKLINRQTFPLSLTPA
GDVFLSQAKIILRTYSETLERCQTIDAAGENVIRFASSQSLYMTHFRDHIEPLMEAGGLD
VDLNSTSWAADQFVTALQQRYCDVILTYWHPAMDFLSPLEVSKCDYLTLSEDEFIPVSKT
DADGSPLFDLRRDPKRQIPLLSYGSASALRSVLDHTLRQQISPPNLLVVNQNSLANSVKA
MILEGFGLGWLPRKLCEAELTEGRLAVAGGEAFVTPLSVRLYRETENSKPTLNSLWRRMG
DSATSIS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttggatattatctggctcagagattttgaagcgctgacaacgcataagaatttttcgcgc
gcggcggaagaacgcaatgtcagccaacctgcattctccaggcgcattcgtgcgctggag
gatgaggtcggcgtgaagttgatcaacaggcaaacttttccgctgtctttgacgccggcc
ggggatgtgttcctgtcgcaggcaaaaatcatcctgcgcacatactccgaaacactggaa
cgctgccagactattgatgctgcaggtgaaaacgtcattcgctttgcgtcgtcacagtcg
ctttacatgacacatttccgggaccacatcgaacctctgatggaggccggcgggctggat
gttgatctcaattcaaccagctgggcggccgatcaatttgtgactgcgctgcagcagcgg
tattgcgacgtcatcctgacctattggcatcccgcaatggactttctctcaccgttggaa
gtcagcaagtgcgactaccttacgctgtcagaggacgaattcatcccggtctcaaaaacc
gatgccgacggcagcccgctgtttgatctgcgccgtgatcccaagcggcagatacccctt
ctatcatatgggagtgcatctgcactgagatcggttcttgaccacactctgcggcagcag
atttcgccgccaaatctgctggtggtgaaccagaattctctggccaactcggtcaaggca
atgattctggaaggtttcgggctgggatggctaccgcgcaaactctgcgaagccgaactc
actgagggccgtctggcggttgccggtggagaagcgtttgtgactcccctatcggtccgc
ctttatcgcgagactgagaatagcaaacccactctgaacagcctgtggcggcggatgggg
gacagcgcgacgtcgatcagctga
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