Phaeobacter inhibens 2.10: PGA2_c05130
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Entry
PGA2_c05130 CDS
T02193
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00260
Glycine, serine and threonine metabolism
pgl00630
Glyoxylate and dicarboxylate metabolism
pgl00670
One carbon pool by folate
pgl00785
Lipoic acid metabolism
pgl01100
Metabolic pathways
pgl01110
Biosynthesis of secondary metabolites
pgl01200
Carbon metabolism
Module
pgl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PGA2_c05130 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PGA2_c05130 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PGA2_c05130 (gcvP)
00670 One carbon pool by folate
PGA2_c05130 (gcvP)
Enzymes [BR:
pgl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PGA2_c05130 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AFO86531
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Position
574400..577249
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AA seq
949 aa
AA seq
DB search
MSFEPTDYLPYDFANRRHIGPSPEEMDDMLAVVGAKNLDALIDDTVPATIRQAAALEFGR
PLSERELLHHMREVAGKNVLKISLIGQGYHGTVTPPAIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMISDLTGLEIANASLLDEATACAEAMTVAQRVSKSKAKAFFVDRDCHP
QNIAVIQTRAAPLGIEVIVGNPDKLDASAVFGALFQYPGTYGHVRDFTDHIAQLHAHKAI
GVVAADPLSLTLLKEPGAMGADIAVGSTQRFGVPVGAGGPHAAYMATKDAYKRAIPGRIV
GVSVDAHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPKGLKAIAQ
RIHRKTVRLAKGLEEAGFKVDPRSFFDTITVDVGPLQEAVWKSAVDEGLNLRRVGETRVG
ITLDEVTRSETIEAVWRAFGIRRSDDDFTPEYRVPENMHRTSDYLTHPIFHMNRAETEMM
RYMRRLADRDLALDRAMIPLGSCTMKLNAAAEMMPLSWPEFANIHPFAPADQMQGYAEMV
SDLSEKLCQITGYDAISMQPNSGAQGEYAGLLSIAAYHRANGQGHRNICLIPMSAHGTNP
ASAQMVGWKVVVVKSAENGDIDLDDFREKAEKHAENLAGCMITYPSTHGVFEETVHEVCK
ITHDHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFAIPHGGGGPGMGPIGVKAH
LQPHLPGHPETGGQEGPVSAAPFGSASVLTISWAYCLMMGGAGLTQATKVAILNANYIAK
RLEGAYDVLYKGPTGRVAHECILDTRPFEASANVTVDDVAKRLIDSGFHAPTMSWPVAGT
LMVEPTESETKAELDRFCEAMLSIREEIRVVEAGEMDADNNALKNAPHTMEDLVKDWDRP
YSREQGCFPPGAFRVDKYWPPVNRVDNAYGDRHLVCTCPPMEDYAEAAE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaacccacggactacctgccgtacgactttgccaaccgccgccacatcggc
ccgtctcccgaagagatggacgacatgcttgccgtggtcggcgccaagaatctggacgcg
ctgattgacgacaccgtgcctgccaccatccgtcaggccgccgcgctggagtttggccgc
cctctgtcggaacgggaactgctgcatcacatgcgtgaggttgcagggaagaacgttctg
aaaatctcgctgatcgggcagggctaccacggcaccgtgaccccacccgccattcagcgc
aacattctggaaaacccggcctggtacaccgcctacacgccctaccagcccgaaatctcg
cagggccgtcttgaggcgctgttgaatttccagaccatgatttcagatctgaccggtctg
gaaatcgccaatgcctctctgctggatgaggccaccgcctgcgccgaggcgatgaccgtg
gcgcagagggtctccaaatcgaaggccaaggcgttttttgtcgaccgcgactgtcacccg
cagaacatcgccgtgatccagacccgcgccgcgccgctggggatcgaggtgattgtcggc
aacccggataagctggacgcctcagcggtctttggcgcgttgttccaataccccggcacc
tatggccatgtgcgcgatttcaccgatcacatcgcccagctgcacgcgcataaggccatc
ggcgttgtcgcggcagatccgctgtcgttgaccctgctgaaggaaccgggcgcgatgggt
gcagacatagctgtcggctcgacccagcgctttggcgtgccggttggcgccggtggcccg
catgcggcctatatggcgaccaaggatgcctacaaacgcgcgatcccgggccgcattgtc
ggcgtgtcggttgatgcccatggcaaccgcgcctatcgcctgtcgctgcaaacccgcgaa
cagcacatccgccgcgagaaggcgacctccaatgtctgtaccgcacaggcgctgctggcg
gtgatggcgtctatgtatgcggtcttccatggccccaaaggtctgaaagccattgcgcag
cgcatccaccgcaagaccgtgcgtctggccaaggggctggaggaagcgggcttcaaggtg
gatcccagatccttcttcgacacgatcaccgtggacgtcggccccttgcaggaggcggtg
tggaaatctgccgtggacgaggggctgaacctgcgccgggttggtgaaacccgcgttggc
atcaccctggatgaggtgacccgctcggaaaccatagaagccgtctggcgcgcctttggt
attcgccgcagcgacgatgatttcacgcctgagtatcgcgtgccggaaaatatgcaccgc
acgtctgactatctcacccatccgattttccacatgaaccgggccgagaccgagatgatg
cgctacatgcgccgcctcgcagatcgtgatctggcgctggaccgcgccatgatcccgctt
ggctcctgcacgatgaagctcaatgccgcggcagagatgatgccgctcagctggccggaa
tttgccaatatccaccccttcgcccctgctgaccagatgcagggctatgcagagatggtc
agcgatctctccgagaagctatgccagatcaccggctatgatgcgatctccatgcagccc
aactctggcgcgcagggcgaatacgcaggccttctgtccattgcggcctatcaccgggcc
aacggtcagggtcatcgcaacatctgtctgatcccgatgtcggcccatggcaccaacccg
gcctctgcccagatggtggggtggaaggttgtcgtggtgaaatccgcagaaaacggcgat
atcgacctcgacgattttcgcgaaaaggcagagaaacacgccgaaaaccttgcaggctgc
atgatcacctacccctcgacccacggcgtgttcgaagaaaccgtgcatgaggtctgcaag
atcacccatgatcacggcggtcaggtctatatcgacggtgctaatatgaacgccatggtg
ggcctgtcccgtcccggcgatctgggcggcgacgtcagccacctgaacctgcacaagacc
tttgccattccccacggcggtggcggccccggcatgggcccgattggcgtcaaggcgcat
ctgcaaccacatctgcccggccacccggaaaccggcggtcaggaaggcccggtttcggcc
gcgcccttcggctctgcctccgttctgaccatcagttgggcctactgcctgatgatgggc
ggtgcgggcctgacgcaggcgacgaaggtggcaattctcaacgccaactacatcgccaag
cgcctcgaaggcgcctatgacgtgctctacaagggccccacgggccgcgtcgcgcatgag
tgcattctggacacccgcccgtttgaggccagcgccaatgtcaccgtggatgatgtggcc
aagcgactgatcgacagcggttttcacgcaccgaccatgtcctggcccgtcgcgggcacc
ctgatggtagaacccaccgagtccgagaccaaggccgagctggaccggttctgcgaggcg
atgctgtcgatccgcgaggaaatccgcgtggttgaggcaggcgagatggatgcggacaat
aacgcgctgaaaaacgccccccacacgatggaagacctcgtgaaagactgggatcgcccc
tattcccgtgaacagggctgcttccctccgggggccttccgggtcgacaaatactggccg
ccggtgaaccgcgtcgacaatgcctatggcgaccgccatctggtctgtacctgcccgccg
atggaagactacgccgaggcggcagagtaa
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