KEGG   Phaeobacter inhibens 2.10: PGA2_c05600
Entry
PGA2_c05600       CDS       T02193                                 
Name
(GenBank) putative DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pgl  Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:pgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgl03400]
    PGA2_c05600
Enzymes [BR:pgl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PGA2_c05600
    5.6.2.6  RNA 3'-5' helicase
     PGA2_c05600
DNA repair and recombination proteins [BR:pgl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PGA2_c05600
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AFO86578
LinkDB
Position
complement(621662..624109)
AA seq 815 aa
MSRLPDVITDWFSTRGWTIHPHQQEMLARADDPATLLIAPTGGGKTMAGFLPTLADLATG
EHRGEYRGLHTLYVSPLKALAADIKRNLRTPVEDMGLSIRIDDRTGDTPASRKRSQRADP
PHILLTTPESLALLTSYEDAPRMFAGLKRVVLDEIHALAESKRGDQLMLALTRLQAICPD
MRRVGLSATVDDPAAIAKYLARHPDPCNIVMADPGPAPDIRMLHTDAAPPWAGGGAAHAI
PAVLEQIKAHRTTLIFHNTRAQAEIFFRNLWLANDDALPIGIHHGSLDRVQRERVEAAMV
RGDLRAVVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPAN
RFEVVECRAALEAVEAGTLDGTPRPPGPRDVLCQHILIRACAGPFAADELYAEITGAGAY
ASLTRAEFDACLDFCATGGYALRVYDQWQRLLQRPDGLWQLRDPRATRRIRMNIGTIQDA
DLLKVRLKRSRGGKPLGEIEETFAATLTPGDTFLIGGQVVRYESLREMTVEVSRNASKTP
KVAVFSGTKFATSTQLSTRILDILQRDSWPDLPSHTADWLALQRQVSEMPRRGQLLLESF
PFRGREYLCVYGFAGRNAMQTLGLLLTKRMEELSLDPLGFVATDYATLIWGLSPVDDPAP
LFDPDKLRAGLDGWLADNAVMKRSFRAVANIAGLIERNTPGQRKNGRQATFSSDILYDTL
RKYDPDHLLLDITRQEALGGLVDFGRIEEMLTRINGNITLNRLSQISPLAAPLLLEVGKV
PVKGAAQEKLLQRETEDLMRLAGLAELEAPTTPVL
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgagcaggcttcccgatgtcatcacggattggttcagcacccgtggctggaccattcat
ccccaccagcaagagatgctggcgcgcgccgatgatccggcgacattgctgattgccccc
accggtggtggcaaaacgatggctggtttcctgcccacccttgccgaccttgcgacgggg
gaacaccggggcgaataccgcgggctgcacacgctctatgtctcgccgctgaaggcgctg
gcggcggatatcaaacgcaacctgcgcaccccggttgaggacatgggcctgtccatccgc
attgatgaccgcaccggtgacacccccgccagccgcaagcgcagccagcgcgccgacccg
ccgcatatcctgctcaccacgccagaaagcctcgcgctgctcacctcttacgaggacgca
ccacgcatgtttgcggggctgaaacgggtggtactggacgaaatccacgccctcgccgag
agcaaacgaggcgatcaactgatgctcgccctgacccgactacaggcgatctgtcccgac
atgcgccgcgtcggcctttcggccaccgtcgatgaccccgccgccatcgcgaaatatctg
gcccgccacccggatccctgcaacatcgtgatggccgatcccggccccgcccccgacatc
cggatgctgcacaccgacgcggccccgccctgggctggtggcggcgcggcccatgccatc
cctgccgtgctggaacagatcaaggcgcacagaaccacgctgatctttcacaacacccgc
gcccaggccgaaatcttctttcgcaatctctggctcgccaatgatgacgcgctgccgatt
ggcatccaccacggctcgcttgatcgggtgcagcgggaacgggtggaggccgccatggtc
cgcggcgatctgcgcgcggtggtctgcaccggctcgcttgatctgggcatcgactggggc
gacgtggatctggtgatccagattggcgcgccaaagaacgtgaaacggctggtccagcgc
atcggacgcgccaaccaccgctacaacgccccctccaaggcgcttctggtgcctgccaac
cggtttgaggtggtcgaatgccgcgccgctcttgaggcggtggaggcaggcacgctggac
ggaaccccacgcccccccggcccccgcgacgtcctgtgtcagcacatcctgatccgcgcc
tgcgccggtcccttcgccgccgatgagctatatgccgagatcacgggagccggcgcctat
gccagccttacaagggcggaattcgacgcctgtctcgatttctgcgccaccggaggctac
gccctccgggtctatgaccagtggcaacggctgctgcaacgcccggacgggctgtggcag
ctgcgcgacccccgcgccacccgccgcatccgcatgaacattggcaccattcaggacgcc
gatctgttgaaggtcaggctcaaacgcagccgtggtggcaaaccgctgggggaaattgag
gaaacctttgccgccactctgacccccggagatacctttctcatcggtgggcaggtggta
cgctatgaatccttgcgtgaaatgacggtggaggtcagtcgcaatgccagcaagacgccc
aaggtggcggtcttctccggcaccaaatttgccacctcgacccagctcagcacccgcatt
ctggacattctgcaacgcgacagctggccggatctgccgtcccataccgccgactggctg
gcgttgcagcgtcaggtctctgagatgccgcgccggggccagctgctgctggagagtttt
cccttccgggggcgcgaatatctctgcgtctatggctttgccgggcgcaacgcgatgcag
accctcggtctgttgctgaccaagcgcatggaagagctgtcactcgacccgctgggcttt
gtcgccacggattatgccacgctgatctggggtctcagcccggttgacgaccccgccccg
ctgttcgacccggacaaactacgcgcgggtcttgacggctggttggcggacaacgcggtg
atgaaacgcagctttcgcgcagtggccaatatcgcaggcctcatcgaacgcaataccccc
ggccagcgcaagaacggccgtcaggcgacgttctcctctgacatcctctacgacacattg
cgcaaatatgatcccgatcacctgcttctcgatatcacacggcaggaggcgcttggcggt
ctggtggatttcggccgtattgaggagatgctgacgcgcatcaatggaaacatcaccctc
aaccgcctgtcacagatctcgccccttgcagcccccctgctgcttgaggtcggcaaggtc
ccggtaaaaggcgcggcacaggaaaaattgctgcaacgcgagaccgaagatctgatgcgc
ctcgccgggctggcagagcttgaagccccgaccacaccagtgctttga

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