Phaeobacter inhibens 2.10: PGA2_c11480
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Entry
PGA2_c11480 CDS
T02193
Name
(GenBank) putative lysine/ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00330
Arginine and proline metabolism
pgl00480
Glutathione metabolism
pgl01100
Metabolic pathways
pgl01110
Biosynthesis of secondary metabolites
pgl04148
Efferocytosis
Module
pgl_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PGA2_c11480
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PGA2_c11480
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
PGA2_c11480
Enzymes [BR:
pgl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
PGA2_c11480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFO87156
LinkDB
All DBs
Position
1263368..1264519
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AA seq
383 aa
AA seq
DB search
MQQIPPLWLSPETHLARSTPDHPILYFSPRVLHEVANRFQHGFPGLVTYAVKANPHPAVL
SNLVAAGITAFDVASPAEMDAVRAASPDAVMHYNNPVRSDVEIAAGIAHGVASWSVDEPS
ELDKLADVPKSCEIAVRFALPVAGAAYDFGSKFGAEPDMAIELLKRVAAEGWTPALCFHP
GTQCEDESAWVEYVHAAKRIIDAAGVKIARLNVGGGFAANRDGVAPDLEKVFAAISAAAE
AAFGAEQPLLICEPGRAMVSESFTLAARIKGMRKAGEVVFLNDGIYGGLVDIRDMGLPGR
VEVVAADGTRRGADAQPRVVFGPTCDSLDRLPDGLPLPRDTQIGDYVLFPGLGAYSSAMS
TQFNGYGLSDVATVIELSGQARP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagatcccacctctctggctttcccctgaaacccatctggcgcgcagtacaccg
gatcacccgatcctgtatttctcgccgcgggtgctgcatgaggtggcgaaccggtttcag
cacgggtttccagggctggtgacctatgccgtgaaggccaacccgcatccggcggtgttg
tccaatctggtggcagctgggatcacggcttttgacgtggcctcgcctgcggaaatggac
gcggtgcgcgcggccagcccggatgcggtgatgcattataacaacccggtacgttcggat
gtggagatagcggcgggcatcgcccatggtgtggccagctggtcggtggatgaaccaagc
gagctggacaagctcgcggatgtgcccaagagctgcgagatcgcggtacgctttgccctg
ccagtggcgggcgcggcctatgattttggcagcaagttcggggccgagccggacatggcg
atagagctgctgaagcgggtggcggcagagggctggacgcctgcgctgtgtttccacccc
ggaacccaatgtgaggatgagagcgcctgggttgaatatgtccatgctgccaagcgcatc
atcgacgccgcaggggtgaagattgcacggttgaatgtcggcggcggctttgcggcgaac
cgcgatggtgtggcgcctgatctggaaaaggtctttgccgcgatttcggctgcggcagag
gcggcctttggtgcggagcaacctttgctgatctgcgagccggggcgggccatggtatct
gaaagctttaccctggcggcgcgcatcaaggggatgcgcaaggccggagaggtggtgttc
ctcaatgacgggatctatggcggtctcgtggatattcgcgatatgggcctgccggggcgg
gtcgaagtggttgccgctgatggcacgcgccggggggctgacgcccagccgcgtgtggtc
tttggccccacctgcgacagtctggaccggctgccggatgggctgccgttgccgcgcgat
acgcagattggtgactatgtgctgttccccggtcttggcgcctattcctcagccatgagt
acgcagttcaacggttacgggctgtctgacgtggcgacggtgatcgagctgtctggacaa
gcgcgcccttaa
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