Phaeobacter inhibens 2.10: PGA2_c11590
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Entry
PGA2_c11590 CDS
T02193
Name
(GenBank) putative proline dehydrogenase transcriptional activator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pgl
Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgl03000
]
PGA2_c11590
03036 Chromosome and associated proteins [BR:
pgl03036
]
PGA2_c11590
Transcription factors [BR:
pgl03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PGA2_c11590
Chromosome and associated proteins [BR:
pgl03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PGA2_c11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR_2
MarR
HTH_20
HTH_5
HTH_Crp_2
DUF7343
NirdL-like_HTH
VMAP-M2
HTH_CodY
HTH_27
HTH_10
GntR
DprA_WH
HTH_Tnp_ISL3
TrmB
HxlR
Fe_dep_repress
HTH_26
HTH_36
LexA_DNA_bind
HTH_47
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AFO87167
LinkDB
All DBs
Position
1278093..1278566
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AA seq
157 aa
AA seq
DB search
MQMDFPGIDRFDQAILTALGEDGRMSIADLARRIGLSKTPTQARLRRLEAEGIITGYRAL
IDPIRLGLDHVAFVEVKLTDTREAALAKFNAALARVPEIEQAHLMASHFDYLLKVRTRSM
SAYRAVLGEKISALPHVASTSTYVAMQAVIEDSAVLP
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggactttcctggaatagatcggttcgatcaggcgattctgactgccttgggg
gaagacggtcgcatgtcgatcgcagatctggcgcgacgcattggtttgtcgaagacgccg
acccaggcgcggctgcggcggcttgaggcagagggcatcatcaccggctatcgcgctttg
atcgatcccattcggttggggctggatcatgtggcgtttgttgaggtgaagttgaccgat
acccgcgaggcagcactggcgaaattcaacgcggccctagcgcgggtgcccgagatcgaa
caggcccatctgatggcctcgcattttgactatctgctgaaagttcggacgcgatccatg
tcggcctatcgcgccgtgctgggcgagaagatatcggcgctgccgcatgtggcgtcgacc
tcaacctatgtggcgatgcaggcagtgatcgaggatagcgcggtgctgccgtga
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