Phaeobacter inhibens 2.10: PGA2_c13610
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Entry
PGA2_c13610 CDS
T02193
Name
(GenBank) diaminopimelate decarboxylase-like protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00300
Lysine biosynthesis
pgl00470
D-Amino acid metabolism
pgl01100
Metabolic pathways
pgl01110
Biosynthesis of secondary metabolites
pgl01120
Microbial metabolism in diverse environments
pgl01230
Biosynthesis of amino acids
Module
pgl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PGA2_c13610
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGA2_c13610
Enzymes [BR:
pgl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PGA2_c13610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Acyl-CoA_dh_M
Acyl-CoA_dh_1
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFO87366
LinkDB
All DBs
Position
1494392..1496878
Genome browser
AA seq
828 aa
AA seq
DB search
MTALFPNTDLRLIDEIATTAGTPFYLYDASVLRGRLDALRAALPQVDFFYSLKSNPNLSV
TRVLHGHGAGCEVSSLLELETSLQAGATPERILMVGPGKSETELARAIELGIKAIVVESA
HELTQIDALARQQGRVQNIALRVNPDFHAGGAKLNMSGRPTQFGIDQSELPDVLKQAESC
AHLRLCGLHAYMGTRILTHETVVANVGNILNLATEVISTLKAPLDFVDVGGGFGIPYYDG
ETELDLDALGQAVTPLVQSFGATHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFA
VCDGGSNVHVAAAGQGFLRKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVL
MATPQVGDLISIGQSGAYGPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVEARLAVQQ
PSDLRLAAHANPSTSHAPAALADLYSSAPGNGLEGTPFSDPCLERLTGLQTLFRETGARL
DRDPESWTALWENPTVRALTTIGVPEKFNGFPLRDSGLGISDCPYGLHVAMVERLARFDA
NCILSLPGPSLSGGAVLATGTDAQIKRFFDGYRFGPQGTFFAVTEPDAGSDASNGRSTLG
LKDGKLVLNGVKTLVGGIARAEIGLFFAHIEETGRMGLVMIAPSDAPDCVKIERLGTNGL
RGADLCQMTLTDFPVTQDMILGSGGRSLRDGFMAINGVFERNRPMVAAMALGSGRGLIEL
MLEDPARLPAYQDLLASHTALLVQLVKVIRAQENRRPKVQDISKVKMQAVSFVDQVVRRI
TDQDPMRFLQDAELRRRCRDVKAFEYMEGTSNIHLLNAYRSYTAGVDQ
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttgtttccaaacaccgacctgcgcctgatcgacgagattgcgacaaccgcc
gggacgccgttctacctctatgatgcctcggtgctgcgggggcgattggatgcgctgcgc
gcagccctcccgcaggtggatttcttctactcgctcaagtccaacccgaacctttcggta
acgcgggtgttgcatggccatggggctggctgcgaagtgtcctcgctgctggagctggaa
acgagcctgcaggcgggtgccacacctgaacgcatcttgatggtgggccccggcaaatcc
gagacagagctggcgcgtgccattgaattgggaatcaaggccatcgtggtcgagtccgcc
catgaattgacccaaattgatgccttggcgcgccagcagggccgcgtccagaatatcgcg
ctgagggtcaacccagactttcacgcaggcggtgcgaagttgaacatgagcggtcgccca
acccaatttggtatcgaccaatccgagctgcccgatgtgctgaagcaggcagagagctgc
gctcatctgcggctgtgtggtctgcatgcctatatgggcacacgtatcctgacccatgaa
actgttgtcgccaatgtgggcaacattctcaatctggcgaccgaggtcatatcaaccctc
aaggcccccctcgattttgtcgacgttggtggtggatttggtattccctattacgatggc
gagacagagctggatctggacgcccttggtcaggcggtcacgccacttgtccagagcttt
ggcgccacacatccaaagacccgtgttgtgatagaactagggcgctatctctctggtccg
tccgggcagtttgtgacccgtgtacagcagaccaagagcagcaagggcgagcattttgcc
gtctgcgatggtggctccaacgtccatgtcgctgcggctggtcagggctttctgcgcaag
aatttcccaatccgcttgttgcgggacggcaaggcagagatcgacgacgaggcggcgcag
ccctggaccctgaccggcccgctgtgcacgccgcaggacgtgatcggtaaatctgtcctg
atggcaacaccgcaggtgggcgatctgatttccatagggcaatccggcgcttatggacca
acggcgtcaccggtcaatttcctcggcttcggcgcccccgcagaagtcatgatcgacggt
acagagctgcggctcgttcggtcccgcgacacggtagaggcgcgcctggcagtgcagcag
ccatctgacctgcggctggccgcccacgccaatcccagcaccagtcacgctcccgcggcg
ctggccgatctttattcctcggcacccggaaatgggctggagggaacaccgttttcagat
ccctgccttgagcgtctgaccggattgcagacgctatttcgcgaaaccggtgcccgtctg
gaccgcgaccccgaaagctggaccgcactgtgggagaacccaacagtgcgtgcgctgacc
accatcggtgtgcctgagaaattcaacggcttcccattgcgtgacagtggccttggcatt
tctgattgcccctatggtctgcatgtcgcgatggtcgaacgtctggcacggtttgacgcc
aactgcatattgtcgctaccggggccgtcgctgtccggtggcgcggtgctggcaacaggc
accgacgcacagattaagcggttctttgacggataccgctttggcccgcaggggacattc
tttgcggtgacagaaccggatgctgggtccgatgcctctaacgggcgcagtacgctgggc
ctgaaagatggaaaacttgtcctgaatggtgtcaaaacattggttggcggcattgcccgc
gccgaaattggcctgttcttcgcgcatatcgaggaaaccggtcgcatggggctggtgatg
attgcaccatctgatgcgcccgactgcgtgaaaatcgaacggcttggcaccaatggtctg
cgcggggcggatctctgccagatgaccttgaccgacttcccggtgacgcaggacatgatc
cttggcagcggaggacgatcgctgcgggatggctttatggccatcaacggtgtctttgaa
cgcaaccgccccatggttgccgcgatggcgctgggatcagggcgcggccttattgagttg
atgttggaagatccggcacggctcccggcgtatcaggacctgttggccagccacactgcg
ctgctggtgcaactggttaaggtgatccgcgcgcaggaaaaccgccgccccaaggttcag
gatatcagcaaggtcaaaatgcaggccgtgagctttgtcgatcaggtggtgcgccggatc
acggatcaggacccgatgcgctttttgcaggatgccgaactgcggcggcgatgccgggac
gtgaaggcctttgagtatatggagggcaccagcaatatccatcttttgaacgcctaccgg
tcttataccgcaggggtggatcaatga
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