Phaeobacter inhibens 2.10: PGA2_c13810
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Entry
PGA2_c13810 CDS
T02193
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pgl
Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_c13810 (phrB)
Enzymes [BR:
pgl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PGA2_c13810 (phrB)
DNA repair and recombination proteins [BR:
pgl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PGA2_c13810 (phrB)
Prokaryotic type
PGA2_c13810 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFO87386
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All DBs
Position
1518835..1520274
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AA seq
479 aa
AA seq
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MTDEKPSNAPILWWVRRDLRLAENPALDAAVAAGAPVIPVFIFDTLDEDLGAAPRFRLGL
GLAHLAKGLERRGARLILRRGPAQEVLTQLITETGAGAIHWTRAYDPQAIARDTAIKKQL
KGQGIAAKSFGGHLLFEPWTVETKTGGMYRVYSPYWKSVRDRDVDGLIAAPSRIPAPAQW
PASDDLDSWQLAAGMRRGADVVAQYCRVGEDAAQARLAEFLDTRVADYKQDRDFPAVDAT
SGLSENLAWGEISPRRMWHHGLEARRAGKSGAEHFLKEIVWREFAYHLMFHTPHILTRNW
RPEWESFRWSEQDDDRVDAWRRGQTGYNFVDAAMRELYVTGKMHNRARMIVASFLTKHML
THWRIGQQWFEECLVDWDPASNAMGWQWVAGSGPDASPFFRIFNPDGQLEKFDPKGRYQS
AWIAEGQANPPQTALDFYRATPLSWGLSPQDRRASPFVDLKEGRARALEAYGQRELPED
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgagaaaccgagcaacgctccgatcctctggtgggtgcggcgcgacctgcgt
cttgcggaaaaccctgcgctggacgcggctgttgctgccggtgctccggttatccctgtc
tttatctttgatacgctggacgaggatctgggggccgcgccacggttccggctggggctg
gggctggcgcatctggccaagggattggagcggcgcggcgcgcggctgatcctgcgccgg
ggccccgcacaggaggtgctgacacagctgatcacagaaaccggtgcgggcgcgatccac
tggacccgcgcctacgacccgcaggccatcgcccgcgatacggccatcaaaaaacagctg
aagggacaggggattgcggccaaatcctttggcggccatctgctgtttgaaccctggacg
gttgagaccaagaccggcggcatgtaccgggtctattcgccctactggaaatctgtgcgc
gaccgcgatgtcgacgggctgatcgccgccccctcacggatcccggcaccggcgcaatgg
ccggcatcagatgatctcgacagctggcagctggctgccggcatgcgccgtggcgcagat
gtggtggcgcaatactgccgcgttggggaagatgccgcgcaggcgcggctggcagagttc
ctcgacacccgcgtcgccgactacaaacaggatcgcgactttccggctgtggatgccacc
tcgggcctgtctgaaaacctcgcttggggagagatcagcccgcgccgcatgtggcatcac
ggattggaggcgcgccgagccggtaaatccggcgctgagcattttctcaaggaaatcgtc
tggcgcgaatttgcctaccacctgatgttccacacaccgcatatcctgacccgcaactgg
cgccccgaatgggaaagtttccgctggtccgagcaggacgatgaccgggtagatgcctgg
cggcgtggtcagaccggttacaatttcgtcgatgccgccatgcgcgaactctatgtgacc
ggcaagatgcacaaccgcgcccggatgatcgtggccagctttctgaccaaacatatgctc
acccattggcgcatcggccagcagtggtttgaggagtgtctggtggattgggacccagcc
tccaacgccatgggctggcagtgggtggccggctccggccccgatgcctcgccgtttttc
cggattttcaaccccgatggccagctggagaaattcgaccccaagggccgctaccaatcc
gcctggatcgccgaaggtcaggccaatccgccgcagactgcgttggatttctaccgcgcg
acacccctgtcctgggggctgtcgcctcaggacagacgcgccagccccttcgttgatctg
aaggaggggcgcgcccgcgcgctggaggcttacggccagcgggaactgcccgaggactga
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