Phaeobacter inhibens 2.10: PGA2_c16260
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Entry
PGA2_c16260 CDS
T02193
Name
(GenBank) putative DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGA2_c16260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_c16260
Enzymes [BR:
pgl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PGA2_c16260
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGA2_c16260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AF1548-like_C
DUF2800
Motif
Other DBs
NCBI-ProteinID:
AFO87626
LinkDB
All DBs
Position
complement(1789728..1790396)
Genome browser
AA seq
222 aa
AA seq
DB search
MTGSKNPDAAGAVNVGRIITSDACVSEGAAWLADQDARFAAAIDLCGPLPLRRKPEGFAE
LLSAIVSQQVSVASANAIWGRMVEAGLDTATAVAAASEDDLRGVGLSRQKIRYAHALAAA
GIDFDALRQLPDSEVIAILTQVSGIGTWTAEIYAMFSLGRADVFAHGDLALQEGARILLD
LPERPKPAAMRRIAEAWSPWRSVAARVLWAYYRVAKDREGIR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacaggatcgaaaaacccggatgcggcgggggcggtcaacgtcggacggatcatcacc
agtgacgcctgtgtatccgaaggagcagcttggctggccgatcaggacgcgcgatttgcc
gccgcgattgacctctgcggaccgctgcccctgcgccgcaaacccgagggctttgccgaa
ttgctcagcgcgattgtcagccagcaggtgagcgttgcctctgccaatgcgatctggggt
cggatggttgaggcagggttggacaccgccactgccgttgccgccgctagcgaggatgat
ctgcgcggtgtcggtctcagccgtcagaaaatccgctacgcccacgccctggctgcggca
ggcattgatttcgacgccctgcgccagttgccggattccgaggtgattgcgatcctgaca
caagtttcgggcatcggcacttggaccgcggaaatctatgcgatgttctcgcttgggcgg
gccgatgtctttgcccatggtgatctggcgttgcaggagggtgcgcggatcctgctcgac
ctgccagagcggcccaaacccgccgcgatgcgccgcatcgccgaggcatggtcgccgtgg
cggtcggttgcggcgcgcgtgctctgggcctattaccgggtggcaaaggacagggaaggg
atccgatga
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