Phaeobacter inhibens 2.10: PGA2_c17190
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Entry
PGA2_c17190 CDS
T02193
Symbol
lpdA1
Name
(GenBank) dihydrolipoyl dehydrogenase LpdA
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00010
Glycolysis / Gluconeogenesis
pgl00020
Citrate cycle (TCA cycle)
pgl00260
Glycine, serine and threonine metabolism
pgl00280
Valine, leucine and isoleucine degradation
pgl00310
Lysine degradation
pgl00380
Tryptophan metabolism
pgl00620
Pyruvate metabolism
pgl00630
Glyoxylate and dicarboxylate metabolism
pgl00640
Propanoate metabolism
pgl00670
One carbon pool by folate
pgl00785
Lipoic acid metabolism
pgl01100
Metabolic pathways
pgl01110
Biosynthesis of secondary metabolites
pgl01120
Microbial metabolism in diverse environments
pgl01200
Carbon metabolism
pgl01210
2-Oxocarboxylic acid metabolism
pgl01240
Biosynthesis of cofactors
Module
pgl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pgl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pgl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PGA2_c17190 (lpdA1)
00020 Citrate cycle (TCA cycle)
PGA2_c17190 (lpdA1)
00620 Pyruvate metabolism
PGA2_c17190 (lpdA1)
00630 Glyoxylate and dicarboxylate metabolism
PGA2_c17190 (lpdA1)
00640 Propanoate metabolism
PGA2_c17190 (lpdA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PGA2_c17190 (lpdA1)
00280 Valine, leucine and isoleucine degradation
PGA2_c17190 (lpdA1)
00310 Lysine degradation
PGA2_c17190 (lpdA1)
00380 Tryptophan metabolism
PGA2_c17190 (lpdA1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PGA2_c17190 (lpdA1)
00670 One carbon pool by folate
PGA2_c17190 (lpdA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgl04147
]
PGA2_c17190 (lpdA1)
Enzymes [BR:
pgl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PGA2_c17190 (lpdA1)
Exosome [BR:
pgl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PGA2_c17190 (lpdA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
GIDA
DAO
HI0933_like
NAD_binding_8
FAD_binding_3
Thi4
Lys_Orn_oxgnase
AlaDh_PNT_C
2-Hacid_dh_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AFO87716
LinkDB
All DBs
Position
complement(1904332..1905726)
Genome browser
AA seq
464 aa
AA seq
DB search
MAAETYDVIVIGAGPGGYVAAIRAAQLGLKTCIVEREHMGGICLNWGCIPTKALLRSSEV
FHLMERAKDFGLKADNIGYDLDAVVKRSRGVAKQLSSGIGHLMKKNKIAVVMGEATLPAK
GKVSVKTEKGTQELAAKNIVLATGARARELPGLEADGDLVWTYKHALDPVRMPKKLLVIG
SGAIGIEFASFYNTLGADTTVVEVMDRVLPVEDAEISAFAKKAFVKQGMKIMEKAMVKQL
DRGKGKVTAHIEVGGKVEKQEFDTVISAVGIVGNVEGLGLEGLGVKVDRTHVVTDEYCRT
GVDGLYAIGDIAGAPWLAHKASHEGVMVAELIAGKHAHAVKPESIAGCTYCHPQVASVGY
TEAKAKELGYDIKVGRFPFIGNGKAIALGEAEGMVKTIFDAKTGELLGAHMVGAEVTEMI
QGYVVGRQLETTEEDLMNTVFPHPTLSEMMHESVLDAFDRVIHM
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagaaacctatgacgtgatcgtaatcggcgcagggccggggggctatgtggcc
gccatccgcgccgctcagctggggctgaagacctgcattgtcgaacgtgagcatatgggt
ggcatctgcctgaactggggctgcatcccgaccaaggcgctgctgcggtcgtcggaggtg
tttcacctgatggagcgggcgaaggatttcgggctgaaagccgacaacatcggctatgat
ctggacgcggtggtcaaacgctcacgcggggtcgccaaacagctcagctccggcatcggc
catctgatgaagaagaacaaaatcgcggtggtgatgggcgaggcgacgctcccggccaag
ggcaaagtgtcggtgaaaaccgaaaagggcacgcaggaactggcggcgaagaacatcgtg
ctggccaccggcgcgcgggcgcgggaactgcccggacttgaggccgacggtgatctggtc
tggacctataaacacgcgctggatccggtgcggatgccgaaaaagctgctggtcattggt
tccggcgccatcggtatcgaatttgccagcttctacaacacgttgggcgccgatacgacg
gttgtcgaagtgatggaccgggtactgccggtggaagacgctgagatttcggcctttgcc
aagaaggcctttgtcaaacagggcatgaagatcatggagaaagccatggtcaaacagctg
gatcgcggcaagggcaaggtgacggctcatatcgaggtcggtggcaaggtcgagaaacag
gaattcgacaccgtgatttctgctgtcggcatcgtcggcaacgttgaggggctgggcctg
gaaggtctgggcgtcaaggttgaccgtacccatgttgtgacagatgaatactgccgcacc
ggtgtcgatgggctttatgccataggcgatatcgccggcgcgccctggctggcgcataag
gcgtctcacgagggcgtcatggtggccgagctgatcgcgggcaaacacgcgcacgccgta
aagcccgaaagcattgccggttgcacctattgccatccgcaggtcgcctccgtcggctac
accgaggccaaggcgaaggaactcgggtacgatatcaaggtcggtcgcttccccttcatc
ggcaacggcaaggcgattgcactgggcgaggccgagggcatggtgaagaccatctttgac
gccaaaacaggtgagcttttgggtgcgcatatggtgggtgcggaagtgaccgagatgatt
cagggttatgtggtgggccgccagctggagaccaccgaagaagatctgatgaacactgtc
ttcccgcatccgactctcagcgagatgatgcatgagagcgtgctcgatgcctttgaccgg
gtgatccatatgtaa
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