Phaeobacter inhibens 2.10: PGA2_c21560
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Entry
PGA2_c21560 CDS
T02193
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PGA2_c21560 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_c21560 (xseA)
Enzymes [BR:
pgl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PGA2_c21560 (xseA)
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PGA2_c21560 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
AFO88145
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All DBs
Position
complement(2387710..2389275)
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AA seq
521 aa
AA seq
DB search
MSDLFDDPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEVGRVFKARSGHLYY
DIKDDRSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGA
LMALLEKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVL
VWPVAVQGANCAPEVARAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEETVARA
VANSQIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWTENQGARLVRS
AGQAVQQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVERRRLRLSEAAA
ALRPSTLRQLVGARQDRLRNLSSRLTLRPIQQDLARQHDRIGQLTQRLEAVQTQRLDRHR
QRLEATGRQLEILSYKATLERGYAVVRSDDGVITRAAEAATQPRLRIEFADAEIDVTPAE
AGGGDGVTPPAKSSSAPKSEASKPGKRPSGKAQPDDQGSLF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacctgtttgatgatccagccccatccgaccggcccgggcagaatgcccccgaa
ttcaccgtttcggagatctccggcgaggtgaagcgtacgctggaggggaccttcggccgc
attcgggtaaagggcgaggtgggccgggtgttcaaggcgcgctccgggcatctctattac
gatatcaaagatgatcgttcagtgctggcctgcaccacgtggaaggggcagatcgcgagc
ctctccgtggtgccggaagaggggctggaggtggttgtcaccggtcggctgacagcgttc
ggcgggcagtcgaagtacaacatgaacgtcgatgaggtcgcggtggccgggcagggcgcg
ctgatggcgctcttggaaaagcgcaagaagcagctggaagccgagggcctgtttgcgccc
gagcgtaagaaaccgttgccgtatctaccgcagatcatcggggtggtgacctcgccctcg
ggggccgtgatccgcgatatcctgcaccggctgcgcgaccgtttcccgcgcaaggtgctg
gtctggccggtagcggtgcagggcgccaactgcgcgccggaggtggcccgcgccatcgag
gggtttaatcagctgacaccggggggcgcgctgccacggccggatctgatcattgtggcc
cgtggcggtggctcgatcgaggatctgtggggctttaacgaggaaaccgtcgcccgggct
gtcgcgaacagtcagattccgctgatctcagccgtggggcatgagacggataccacattg
attgattttgtgtccgaccgtcgcgcgccgacccctaccgctgcagcggagctggcagtg
ccggtgcggctggaactgctgggctggacagagaatcagggcgcgcggctggtgcgctct
gccgggcaggcggtgcagcagcgacggcagcggctgaacgatctcgcgcgggctctgcct
aagcccgatacgctgttggaaacgccacgccagcgactggaccgggtgtccgaacggttg
cccgatgcgttgatccggggggtggagcgtcgccgcctgcggctgagcgaggccgctgcg
gcgctccggcccagcacgctgcgccaactggtcggtgcccgtcaggaccggctgcgtaat
ctctcgtcgcggctgacgttgcgcccgatccagcaggatcttgcccgtcaacatgatcgc
attggccagctgacgcagcggcttgaggccgtgcagacgcagcggctggaccggcaccgg
cagcggctggaggcaacgggtcgacagctggagatcctcagctacaaggccacgctggag
cgcggctacgcggtggtgcgcagcgatgacggtgttatcacccgcgcagcagaggcggct
acccagccacggttgcggatcgaatttgccgatgcggagattgacgtgacgcctgcggag
gcagggggcggagacggggtgacgccgcccgcaaagagttccagcgcacccaagtcagag
gcgtccaaaccgggtaaacgcccaagcggcaaggcgcagccggatgatcaggggtcgctg
ttctga
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