Phaeobacter inhibens 2.10: PGA2_c22590
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Entry
PGA2_c22590 CDS
T02193
Name
(GenBank) putative serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00260
Glycine, serine and threonine metabolism
pgl00460
Cyanoamino acid metabolism
pgl00630
Glyoxylate and dicarboxylate metabolism
pgl00670
One carbon pool by folate
pgl00680
Methane metabolism
pgl01100
Metabolic pathways
pgl01110
Biosynthesis of secondary metabolites
pgl01120
Microbial metabolism in diverse environments
pgl01200
Carbon metabolism
pgl01230
Biosynthesis of amino acids
pgl01240
Biosynthesis of cofactors
pgl04981
Folate transport and metabolism
Module
pgl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PGA2_c22590
09102 Energy metabolism
00680 Methane metabolism
PGA2_c22590
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PGA2_c22590
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PGA2_c22590
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PGA2_c22590
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PGA2_c22590
Enzymes [BR:
pgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PGA2_c22590
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
SelA
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AFO88248
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All DBs
Position
2497429..2498736
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AA seq
435 aa
AA seq
DB search
MPQAPQSWLPEASITRIEDITRATAGAGSDQLLDRIATLVEENRVIHEEDCFNLNPATNV
MNPKAEALLASGLGSRPSLGHPGDKYEMGLEAIEEIEVIAARLACEVFDAEFSEIRVPSG
ALANLYGFMATCRPGDTIIAPPASIGGHVTHHAAGCAGLYGLRSIEAPVLEDGYTVDLEA
LQQLAERERPKLITIGGSLNLFEHPVAGVRAIADQIGAKVMFDAAHQCGIIAGKAWADPL
AEGAHFMTMSTYKSLGGPAGGLIVSNDAEIAKALDSIAFPGMTANFDVAKSAALAVTLLD
WRDHGRAYASEMIAMAKSLAAALEAEGLPLFKTADGITMSHQFALCAAPYGGGQAASKLL
RKNGFLACGIGLPIPAVEGDMNGLRIGTPELVRWGMTSKDAAALAALIAAALRGEAVLDR
VSAWRRQFDRLHFVN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagcgccccaaagctggcttcccgaagcgagtatcacccgtatcgaggatatc
acccgggccacggccggtgcagggtccgatcaattgctggaccgtatcgcgaccctggtc
gaagaaaaccgtgtgatccacgaggaagactgcttcaacctcaatcccgcgacaaatgtg
atgaatccaaaggcggaggcgttgcttgcctcaggtctggggtcacgcccttcgctgggg
caccccggtgacaaatatgagatggggctagaagccattgaagaaatcgaggtcatcgca
gcgcgtcttgcctgcgaggtctttgatgcggaattttccgaaatccgggtgccatccggt
gcgttggccaatctctacggctttatggcgacctgccgcccgggcgacaccatcatcgca
ccacccgccagcatcggcgggcatgtgacccatcatgcggccggctgtgccgggctatac
gggctacgcagtatcgaggcgccggtgcttgaagatggctataccgtcgatctggaggcc
ctacagcaactcgcagagcgagagcgccccaagttgatcaccatcggcggcagtctcaac
ctattcgagcaccccgtcgcaggcgtccgggcgatcgcggatcagattggcgccaaagtc
atgtttgacgcggcccatcaatgtgggatcatcgcggggaaggcctgggccgatcctctc
gccgagggcgcccatttcatgaccatgagcacctacaagagccttggcggtcctgccggt
ggattgatcgttagcaacgatgctgaaatcgccaaggctctggacagtatagcttttccc
ggcatgacggcaaacttcgatgtggcaaaatccgcagccctcgcggtgaccctgctggac
tggcgtgaccacggccgggcctatgcatccgaaatgattgcgatggcaaagagccttgcc
gccgcgctggaggcggaaggcctgccactgttcaaaaccgccgatggcatcaccatgtcc
catcagtttgccctgtgcgcagccccctatggtggtgggcaggcagcttccaagctgctg
cgcaagaacgggtttctggcctgcggaattggcctaccaattcccgcggtagagggcgat
atgaacggcctgcggattggcacgccagaactggtgcgctggggtatgaccagcaaggat
gccgctgcactggccgcgctgatcgcggccgctctgcgcggggaggcggtgctggatcgg
gtttccgcttggcggcggcagtttgaccggcttcacttcgtcaactga
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