Phaeobacter inhibens 2.10: PGA2_c22920
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Entry
PGA2_c22920 CDS
T02193
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGA2_c22920 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgl03019
]
PGA2_c22920 (groL)
03110 Chaperones and folding catalysts [BR:
pgl03110
]
PGA2_c22920 (groL)
03029 Mitochondrial biogenesis [BR:
pgl03029
]
PGA2_c22920 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgl04147
]
PGA2_c22920 (groL)
Enzymes [BR:
pgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PGA2_c22920 (groL)
Messenger RNA biogenesis [BR:
pgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PGA2_c22920 (groL)
Chaperones and folding catalysts [BR:
pgl03110
]
Heat shock proteins
HSP60 / Chaperonin
PGA2_c22920 (groL)
Mitochondrial biogenesis [BR:
pgl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PGA2_c22920 (groL)
Exosome [BR:
pgl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PGA2_c22920 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PGA2_c22920 (groL)
Exosomal proteins of breast cancer cells
PGA2_c22920 (groL)
Exosomal proteins of colorectal cancer cells
PGA2_c22920 (groL)
Exosomal proteins of bladder cancer cells
PGA2_c22920 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFO88281
LinkDB
All DBs
Position
complement(2529560..2531212)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFDTDARNRMLNGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGLKQVAAGLNPMDLKRGI
DLATAKVVEGIKAMAREVKDSAEVAQVGTISANGESEIGQQIADAMQKVGNEGVITVEEN
KGLETETTVVEGMQFDRGYLSPYFVTNADKMVADLEDCMILLHEKKLSSLQAMVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTMDMLGTAKKIEITKDETTIVDGAGEKAEIEARVAQIRAQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGVIVGGGVALV
QAGKALEGLEGANADQNAGIVIVRKAIEAPLRQIAENAGVDGAVVAGKVRESSDNNFGFN
AQTEEYGDMFAFGVIDPAKVARTALEDAASVAGLLITTEAMVADKPSKDGAGAGGGMPDM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtcaaattcgacaccgatgcccgcaaccgtatgctgaacggcgtc
aacattctggctgatgctgtgaaagtgaccctgggccccaaaggccgcaacgttgtgctg
gacaaatcttttggcgcaccgcgcatcaccaaagacggtgtctcggttgccaaagaaatc
gaactggaagacaagttcgaaaacatgggcgcccagatggtaaaggaagttgcttcccgc
accaacgatgaagctggcgacggcaccaccactgccaccgttctggcacaggcgatcgtt
aaagaaggcctgaagcaggttgctgctggcctgaacccgatggatctgaagcgcggcatc
gacctggcaacggccaaagtggtcgaaggcatcaaggcaatggcccgcgaagtcaaagac
tccgctgaagtcgcacaggtcggcaccatctctgccaatggcgaatctgaaatcggtcag
cagattgctgacgcgatgcagaaagtcggcaatgaaggcgtgatcaccgtcgaagaaaac
aagggtctggaaacagagaccactgttgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacgccgacaagatggttgcagatctcgaagactgcatgatc
ctgctgcacgaaaagaaactctcctcgctgcaggccatggtgccgctgctggagcaggtg
atccagtcgcagaagccgctgctgatcattgcagaagatgttgaaggcgaagcgctggcc
accctcgtggtcaacaaactgcgcggcggcctgaaaattgctgctgttaaggcaccgggc
tttggcgaccgtcgtaaggccatgctgcaggacatcgcgatcctgaccggcggccaggtg
atctccgaagatctgggcatgaagcttgagtccgtgaccatggacatgctgggcaccgcc
aagaagatcgaaatcaccaaggacgaaaccaccatcgttgacggtgcaggcgaaaaagcc
gagatcgaagcacgtgttgcccagatccgcgctcagatcgaagagaccacctcggactac
gaccgtgaaaagctgcaagagcgcgttgccaaactggcaggtggtgttgccgtgatccgc
gtcggtggtatgaccgaagttgaagtcaaagagcgcaaagaccgtgtggacgatgctctg
aacgcaacccgcgcagctgtgcaggaaggcgtgatcgtcggcggtggtgttgctctggtt
caggccggcaaagcgctggaaggcctcgaaggcgccaacgcagaccagaacgctggtatc
gtaatcgtgcgtaaagcaatcgaagcgcctctgcgccagatcgctgaaaacgccggtgtc
gacggtgctgttgtggccggcaaggtccgcgaaagctccgacaacaactttggcttcaac
gctcagaccgaagaatatggcgatatgttcgcctttggtgtgatcgatccggccaaagtg
gcgcgtaccgctctggaagacgcagcatcggttgccggtctgctgatcaccaccgaagcc
atggttgccgacaaaccgtccaaagacggtgcaggcgccggcggcggcatgcccgacatg
ggcggcatgggcggcatgggcggcatgatgtaa
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