Phaeobacter inhibens 2.10: PGA2_c24560
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Entry
PGA2_c24560 CDS
T02193
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00550
Peptidoglycan biosynthesis
pgl01100
Metabolic pathways
pgl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGA2_c24560 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PGA2_c24560 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgl01011
]
PGA2_c24560 (mrdA)
Enzymes [BR:
pgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PGA2_c24560 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pgl01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PGA2_c24560 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AFO88438
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All DBs
Position
2709777..2711723
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AA seq
648 aa
AA seq
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MKRNVKDVEASHRKLSRRALLLGGLQLAFAGGLAMRMRHLQVDQADQFRLLAEENRINLR
LIPPARGQIYDRNGTILAQNAQSYRITVVPEDAGDVGDVIGKLSRLLTLDPEDIERAMAE
MRRSPPFLPITLADQISWDDISKVAVNAPALPGITPEVGLTRVYPQQEDFAHVVGYVGPV
SDYDLSKMEDPEPVLMIPRFQIGKVGFEAKREDVLRGKAGAKRVEVNATGRVMRELDRRE
GEAGADMQLTVDADLQYYTQARLGKESASAVVIDCESGDVRAIASSPSFDPNLFVRGISV
ADYRMLTEDPYRPLANKSVQGTYPPGSTFKMITALAALEEGLIGTEDTVWCPGHLEVSGR
RFHCWKRAGHGHVDLNTSLKSSCDVYYYDLAIKVGIDKISAMAKRFGLGVRHDLPMSAVA
KGIAPNKEWKSKTYGQDWLVGDTVNSSIGQGYLLASPMQLAVMTARLATGRSVTPRLLKS
IDGVEQPSGAGEPIGVNENNLRTIRRGMYSVSNERRGTGYRSRIIADGMRMAGKSGTSQV
RNITAAERAAGVIRNEDLPWERRDHALFVAYAPADDPKFAVAVVVEHGGGGSKAAAPIAR
DVLLQALYDGSPPLEAYPKKDRTNIEALQQRLERERIQRNRDSGSGQA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaacgtcaaagacgtcgaagcctcacaccgcaaactcagccgccgcgcgctg
cttttgggcgggttgcagctggcctttgccggcggtcttgcgatgcgaatgcggcacctt
caggtcgatcaggccgatcagttccgcctgctggccgaggaaaaccgcatcaacctgcgc
ctgatcccgcccgcccgcggacaaatctatgaccgcaacggcaccattctggcgcaaaac
gcccaatcctaccggatcaccgtggtgccggaggacgcgggcgatgtgggtgacgtcatc
ggcaagctgtcgcgcctgctgacgctggaccccgaagacatcgagcgcgcgatggccgag
atgcgccgctcaccgccgttcctgccgatcacactggccgatcagatcagctgggatgat
atctccaaggtggcggtgaacgcccccgccctgcccggcatcacgcctgaggtcggcctc
acgcgggtttacccccagcaggaggattttgcccacgtggtgggctatgtcggcccggtc
tccgactatgacctcagcaagatggaggaccccgagccggtgctgatgatcccgcgcttc
cagatcggcaaggtcgggttcgaggccaagcgcgaagacgtgctgcgcggcaaggccggc
gccaagcgggtcgaggtcaacgccaccggacgtgtcatgcgcgagctggaccgccgcgag
ggtgaggccggcgcggatatgcagctgaccgttgatgcggatttgcagtattacactcag
gcccgtctgggcaaggaaagcgccagcgccgtagtgatcgactgcgagagcggcgatgtg
cgcgccatcgcctcctcccccagctttgatcccaatctctttgtgcgcggtatttcggtc
gccgactaccggatgctgaccgaagacccctatcgcccgctggccaataaatcggtgcaa
ggcacctatccgcccggatcgaccttcaagatgatcaccgccctcgccgcgctggaagaa
ggcttgatcggcaccgaagacaccgtctggtgccccggccatctggaggtctcgggccgc
cgtttccactgctggaaacgcgcaggccacggccatgtggatctcaacacctcgctcaaa
agctcctgcgacgtctattattacgacctcgccatcaaggttggcatcgacaagatttcc
gccatggcgaaacgcttcggccttggcgtgcgccatgatctgccgatgtccgccgtggcc
aaggggatcgccccgaacaaggaatggaaatcgaaaacctacggtcaggactggctggtt
ggcgataccgtgaactcctccatcgggcagggctatcttttggcctcgccgatgcagctg
gccgtgatgacagcgcgtctggccactggtcgctcggtcacgccgcgcctgctgaaatcc
atcgacggggtggagcagcccagcggcgccggagagccgatcggcgtcaatgaaaacaac
ctgcgcaccatccgccggggcatgtactcggtcagcaatgagcggcgcggcaccggctac
cgctcccggatcatcgccgacggcatgcgtatggccggcaaaagcggcaccagccaggtg
cgcaatatcaccgccgcagaacgcgccgccggggtgatccgcaacgaggatctgccgtgg
gaacgccgcgaccatgcgctgtttgttgcctatgcgccggcagatgatccgaaatttgcc
gtggcggtggtggtcgaacatggcggcggcggttccaaggcagcggcccctatcgcgcgc
gatgtgctcttgcaggcgctttatgatggcagcccgccgctggaggcctaccccaagaag
gaccgcaccaacatcgaagccctgcagcaacgtctggaacgtgagcgcattcagcgcaat
cgcgacagcggcagcgggcaggcttga
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