Phaeobacter inhibens 2.10: PGA2_c28170
Help
Entry
PGA2_c28170 CDS
T02193
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03030
DNA replication
pgl03430
Mismatch repair
pgl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGA2_c28170 (dnaX)
03430 Mismatch repair
PGA2_c28170 (dnaX)
03440 Homologous recombination
PGA2_c28170 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgl03032
]
PGA2_c28170 (dnaX)
03400 DNA repair and recombination proteins [BR:
pgl03400
]
PGA2_c28170 (dnaX)
Enzymes [BR:
pgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGA2_c28170 (dnaX)
DNA replication proteins [BR:
pgl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGA2_c28170 (dnaX)
DNA repair and recombination proteins [BR:
pgl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGA2_c28170 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
AAA_5
AAA_22
AAA_19
AAA_14
AAA_24
AAA_16
TIP49
AAA_18
Rad17
SLFN-g3_helicase
DUF815
AAA_assoc_2
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
AFO88792
LinkDB
All DBs
Position
3099345..3101180
Genome browser
AA seq
611 aa
AA seq
DB search
MSDTAGDTAGQAPDQGSGQYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIM
TGIRGTGKTTTARIIAKGMNCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASR
TGVGDIREIIDSVQYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTE
IRKVPVTVLSRCQRFDLRRIEPEVMIALLQKIAGAENAQIAEDALALITRAAEGSARDAT
SLLDQAISHGAGETTADQVRAMLGLADRGRVLDLIDMILRGDAASALTELSAQYAEGADP
LAVLRDLAEITHWVSVVKITPDAAEDPTVSPDERARGSQMAEALPMRVLTRMWQMLLKAL
EEVAAAPNAMMAAEMAVIRLTHVADLPTPEQLMRTLQDTPPPPPPGGHMNAPMGSSGGPS
GPGSAGGYVPQQAGPQGGMPGGPQGGPTMSAGNGQATALAPQADSALARYPSFEHVIELI
RVKRDGLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQTWTHARWVISLAN
EGGGETITERENAAENALRAEASTHPMVQAVLESFPKAKIRHIRTAEDLAAEVEAEALPE
VEDEWDPFEEE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacagcaggcgacacagcaggccaagcaccggaccaagggtctggccaatat
caggttctggcccgcaaataccggcctgaaactttcgccgatctggtgggtcaggacgcc
atggtgcggacgctgaaaaacgcctttgccgccgaccggattgcacaggccttcatcatg
accggcattcgcggcaccggtaagacgaccaccgcacggatcatcgccaagggcatgaac
tgcatcggtgaggatggtcagggtggcccgaccaccgagccgtgcggcaaatgcgaacat
tgcacggcgatcatggaaggtcggcatgtcgatgtaatggagatggacgccgcctcgcgc
accggggtgggtgacatccgcgaaatcatcgattcggtgcagtaccgcgccgcctctgcc
cgctacaagatctacatcatcgatgaggtccacatgctgtcgacctccgccttcaacgcg
ctgttgaagacgctggaggaaccgcccgcacatgtgaaattcatcttcgccaccacggag
atccgcaaggtaccagtgacggtgctgtcgcgctgccagcggttcgatttgcgccggatt
gagccggaggtgatgattgccctgttgcaaaagatcgcaggcgctgagaatgcccaaatc
gccgaggatgcgctggccctcatcacccgcgcggccgaggggtcggcccgtgatgccacc
tcgctcctagatcaggcgatttctcatggcgcaggcgaaacaacagctgatcaggtccgc
gccatgttgggactggcggatcgcgggcgggtccttgatctcatcgacatgattctgcgt
ggcgacgcggcttcggcgctgaccgaactcagcgcgcaatatgccgagggagccgatccg
ctggcagtgctacgcgatcttgctgaaatcacccattgggtatccgtggtgaagatcact
cccgatgccgccgaagaccccaccgtcagcccggatgagcgcgcccgtggcagccagatg
gccgaggcattgccaatgcgggtgctgacgcggatgtggcagatgctgctgaaagcgttg
gaagaggtcgccgccgcgcccaacgctatgatggcggccgagatggcggtgatccgtctg
acacatgtggccgacctgccgacgccggaacaactgatgcgcaccctgcaggatacacct
ccgcctccgccacctggcgggcatatgaatgcgccgatggggagctctggcggaccatct
ggccccggcagcgcaggcggttacgtccctcagcaggccgggccacagggcggcatgccg
ggcggtccccaaggcgggccaacgatgtcagcaggcaatggacaggccaccgccctcgcc
ccgcaggcggacagcgcgcttgcgcgctatcccagctttgagcatgtaattgaactgatc
cgggtaaaacgcgacggtctgctgctggaatatgtaaaaacctatctgcgcctggtgtcc
tatcagccgggccggatcaccatccagccaacggatgacgcgcccaaggatctcgccgcc
cgtctgggccagcagttgcagacctggacccatgcccgttgggtgatttccctcgccaat
gagggcggcggcgaaaccatcactgagcgtgaaaacgccgcagaaaacgccctgcgggcg
gaagccagcacccacccgatggtacaggcggtccttgagagcttccccaaggcaaagatc
agacacatccgtacagcagaagatctcgccgccgaggtcgaggcggaagccctgccagag
gtcgaggacgaatgggatcccttcgaagaagagtga
DBGET
integrated database retrieval system
