Phaeobacter inhibens 2.10: PGA2_c29710
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Entry
PGA2_c29710 CDS
T02193
Name
(GenBank) hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
pgl
Phaeobacter inhibens 2.10
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgl03019
]
PGA2_c29710
Messenger RNA biogenesis [BR:
pgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PGA2_c29710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_16
Rad17
AAA_22
SKI
DUF2642
Motif
Other DBs
NCBI-ProteinID:
AFO88941
LinkDB
All DBs
Position
complement(3242414..3243304)
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AA seq
296 aa
AA seq
DB search
MRDPDIACDPTAVPIVLVTGPSGAGRTTAINVLEDLGFEAIDNLPLRLLPGLVDANSLTR
PMALGLDSRNRDFSPAALLDVIDMLSARRDLDLTVLYLDADREVLLRRYSETRRRHPLAP
AEDPEVGVLREIDLMLPIRDRADLLLDTSELNIHQLKADIERRFAPGGRSLAVSLQSFSY
KRGVPRSIDMVFDCRFLRNPYWEQSLRSLDGRDVAVQSYVREDSRYEPFFDRVLDLIRLL
LPAYREEGKSHLSIAFGCTGGQHRSVTLAETLAKDLAEDGQQVSIRHRELHGPRQK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacccggatattgcctgcgacccgacggcggtgccgatcgtcctggtgacaggc
ccgtctggtgcagggcgtaccactgcgatcaatgtgcttgaggatctcgggtttgaggcg
attgacaaccttccgcttcgactactgccgggactggttgacgccaacagcctgactcgc
ccgatggcgcttggactcgacagccgcaaccgggatttctccccggcggcgctgcttgat
gtcatcgatatgctgtcagcgcgccgggatcttgatctgaccgtgctgtaccttgatgcg
gaccgtgaagtcctgctgcggcgctattcggaaacgcgcaggcggcacccgcttgctccg
gcagaagatccggaggtcggggtcttgcgtgagattgatctgatgctgccgatccgcgac
cgcgctgatctgttgctggatacctccgaattgaacatccatcagctaaaggcggatatc
gaacggcgctttgcccctggcgggcggtccttggctgtgtccttgcagagcttttcctat
aaacgcggcgttccgcgcagtatcgatatggtgtttgactgccgctttctgcgcaaccct
tactgggaacagagcctgcgcagtctggacgggcgcgacgtggcggtacagtcttacgtt
cgtgaggacagccgctatgagccgttcttcgatcgggtgctggatctgatccgcttgctg
ttgcctgcctaccgagaagaaggtaaatcgcatctctctatagcatttggatgcaccgga
gggcagcaccgctcggtcacactggcagaaaccctggcaaaggatcttgcggaagacggg
cagcaggtgtcaattaggcaccgcgagctgcacggcccgcgacagaagtga
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