Phaeobacter inhibens 2.10: PGA2_c30900
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Entry
PGA2_c30900 CDS
T02193
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00061
Fatty acid biosynthesis
pgl00071
Fatty acid degradation
pgl01100
Metabolic pathways
pgl01212
Fatty acid metabolism
pgl02024
Quorum sensing
pgl04146
Peroxisome
Module
pgl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PGA2_c30900
00071 Fatty acid degradation
PGA2_c30900
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PGA2_c30900
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGA2_c30900
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgl01004
]
PGA2_c30900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgl04147
]
PGA2_c30900
Enzymes [BR:
pgl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PGA2_c30900
Lipid biosynthesis proteins [BR:
pgl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PGA2_c30900
Exosome [BR:
pgl04147
]
Exosomal proteins
Exosomal proteins of breast milk
PGA2_c30900
Exosomal proteins of breast cancer cells
PGA2_c30900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
YwhD
Motif
Other DBs
NCBI-ProteinID:
AFO89053
LinkDB
All DBs
Position
complement(3358782..3360725)
Genome browser
AA seq
647 aa
AA seq
DB search
MMSLPALLERNAAQIGDRQAYREKEFGIWQCWTWSETQKEIEALALGLINLGVNEGDFIA
IIGRNRPSLYWAMVAAQSVGAVPVPLYQDAVAEEMAYVLGHCGARFVIAGDQEQVDKVIE
VQEELSNLEQIIYLDPRGMRKYDHHALHEYAHVQDQGRAARDEWTPDLEARKAKLTYDST
CVMLYTSGTTGKPKGVVLSNRNVIESAKNSAEFDKLTAGENILSYLPMAWVGDFIFSVGQ
AYWCGFCVNCPESADTMMTDLREIGPTYFFAPPRVFEGQLTSVMIRMEDASTLKRKMFHH
FLAHAKKVGGDILDGRPVGLMDRLKYKLGDLLVYGPLKDTLGYGRIRVGYTAGEAIGPEI
FDFYRSLGINLKQLYGQTEATVFITVQPDGEVRADTVGVPAPDVEIKIADNGEIFYRSPG
TFVEYYNNPESTASTKDAEGWVATGDAGFFEEDSGHLRIIDRAKDVGKMADGAMFAPKYV
ENKLKFYPDILEVVLFGNGRDRCVAFINIDLTAVGNWAERNNIAYASYQELAGHPKVLQS
IREHVETVNESVAQDVMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRVIVEDKYSDIIT
GLYDGSSQISTRTEVTYEDGRKGEISATLDIIDAKVVPVTTQAVAAE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccctgccggcgctgcttgaacgcaatgcggcgcagattggcgaccgccaagcc
tatcgggaaaaggaattcggcatttggcaatgctggacctggtccgaaacccagaaggaa
atcgaggcgcttgcgcttgggttgatcaacctcggggttaacgagggagatttcatagct
atcatcgggcgcaaccgtccatcgctttattgggcgatggttgcggcgcaatcggtgggc
gcggtgccggtgccgctctatcaggacgcggtggcggaagagatggcctatgtgctgggc
cactgcggtgcgcggtttgtgatcgcgggtgaccaggaacaggtcgataaggtcatcgag
gttcaggaagagctgagcaatctggagcagatcatctatctggatccgcgcggcatgcgc
aaatatgaccaccatgcgctgcatgaatatgcgcatgtgcaggatcagggccgcgcggcg
cgcgacgaatggacgcctgatctggaagcccgcaaggccaagctgacctacgacagcacc
tgcgtgatgctttatacgtctggcaccacgggcaagcccaaaggcgttgttctgtccaat
cgcaatgtgatcgaaagcgctaagaactctgcggagtttgacaagctgacggcaggtgaa
aatatcctgtcctatctgccgatggcctgggttggtgatttcatcttctcggttgggcag
gcctattggtgtggcttctgcgtgaactgcccagagagcgccgacaccatgatgacggac
ctgcgcgaaatcgggccaacttatttcttcgcaccgccgcgtgttttcgaaggccagctg
accagcgtcatgatccgcatggaagacgcgagcacgctgaagcgcaagatgttccaccac
ttcttggcacatgcgaaaaaggtgggcggtgacatcctggatggtcgcccagtcggattg
atggaccggttgaagtacaaactgggtgatctgctggtctacggtccgctgaaggatacg
ctgggctatggccgcattcgcgttggctacactgccggtgaggcgatcgggccggagatt
tttgatttttaccgcagcctgggcatcaacctcaaacaactctacggccagacagaggcg
acggtgttcatcaccgtgcagcccgatggtgaggtgcgcgctgataccgtgggtgttcca
gcccccgatgtagagatcaagatcgccgacaatggtgagattttctaccgctcgccggga
accttcgtcgaatattacaacaacccggaatccacggcctcgaccaaggatgccgaaggt
tgggtcgcaacgggtgacgcaggtttctttgaagaagacagtggccatctgcggatcatc
gaccgcgccaaggacgttggcaaaatggcggatggggcgatgtttgcgcccaaatacgtc
gagaataagctgaagttctatccagatattctggaagttgtgctgtttggcaatggccgg
gaccgctgtgtcgcctttatcaatatcgacctgacggcggtgggcaactgggcggagcgg
aacaatattgcctatgcgtcctatcaggagttggcgggtcatccgaaggtgctgcaatcc
attcgggaacatgtcgaaaccgtcaacgagtcggtggcgcaggatgtcatgctttcgggt
tgtcaggtgcaccgctttgttgtgctgcacaaagagctggacgccgatgatggcgagatg
acccggacccgtaaggtgcgccgtgtgattgtcgaggataagtattccgacattatcaca
gggctttacgatggctcctcgcagatttcgacacgtacggaagtgacgtatgaggacgga
cgcaagggtgagatcagcgccacgctggatattatcgatgccaaggttgtgccggttacc
acacaggcggtggccgcggaatga
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