Phaeobacter inhibens 2.10: PGA2_c33050
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Entry
PGA2_c33050 CDS
T02193
Name
(GenBank) putative tRNA-nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGA2_c33050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgl03019
]
PGA2_c33050
Enzymes [BR:
pgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PGA2_c33050
Messenger RNA biogenesis [BR:
pgl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PGA2_c33050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AFO89266
UniProt:
A0AA86D9B8
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All DBs
Position
complement(3593407..3594561)
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AA seq
384 aa
AA seq
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MTHIQAKWLEDPAVQHVCDVLTKGGAEVYFVGGCVRNALLGVPVSDLDLSTNVPPQRVMA
LAEEAGIKAIPTGIDHGTVTLVYRGTPYEITTFRRDVVTDGRRAVVAFSDRIEEDAARRD
FTMNALYARPDGGLVDPLNGLPDLRARLVRFIGSSAQRIREDYLRSLRYFRFHSWYGNPD
AGFDPDALSAIAENLDGIGSLSRERVGSEVLKLLAAPDPAPAIAVMRQVGLLSLILPGSD
DRALGPLVHLEGGRPAEPLCRLAALGGDASWEALRLSKTQAADVRLLRAAAEGTDGPAEL
AYHHGVSTARNVMLLRSALLEMPITPDLEAEITKGAGAVFPLSAKDLMPDLQGAALGAAL
KSLQKDWIRSGFMLDRDALLKRLL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgacccatatacaggccaaatggctggaggatccagctgtacagcacgtctgcgacgtc
ctgacaaagggcggggcagaggtctattttgtcggcggttgtgtgcgcaacgcgctattg
ggggtgccggtttcggatcttgatctctcaaccaatgtgccaccacagcgtgtcatggcc
cttgctgaagaggccgggatcaaggctatacccacaggcattgaccacggtacggtgaca
ttggtctatcgcgggacaccttatgagatcaccacgtttcgccgtgatgtggttaccgat
ggccgacgcgccgtcgtggcattttccgaccggattgaggaggacgctgcgcggcgcgat
ttcaccatgaatgcgctttatgcccgtcccgatggcgggctggtggatccgctgaatggt
ctgccggatctgcgcgcaagactcgtccggttcatcggcagttcggcgcagcggatccgt
gaggactatctacgctcgctgcgctatttcaggtttcattcctggtatggcaacccagat
gcaggatttgacccggacgccctgtcggccatcgccgaaaacctggatgggattggcagc
ctctcgcgtgaacgggttggcagtgaagtgctgaagctgcttgcggcgcctgatccggcg
ccggcgattgccgtgatgcggcaggttgggctgctatctctgattcttccgggaagcgat
gatcgcgccctggggccgctcgttcatcttgagggggggaggcctgccgaaccgctttgc
cgcctggccgcgctgggcggggatgcgtcatgggaggccttacgcctgagtaaaacccaa
gctgcggatgtgcgcctgctgcgcgcagctgcggaaggcacggatgggccggcggaactg
gcctatcatcacggcgtgagcacggcgcgcaatgtgatgctgttgcgctctgccttatta
gaaatgccgattacacctgatttagaggctgaaattaccaaaggagccggagctgtgttc
ccgctttctgccaaggatttgatgccagacctgcaaggagcagcgctgggtgcagcgctc
aaatccttgcagaaggactggatcagatctgggttcatgcttgaccgcgatgcgttgctg
aaacggctgctctaa
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