Phaeobacter inhibens 2.10: PGA2_c34600
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Entry
PGA2_c34600 CDS
T02193
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase DapE
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pgl
Phaeobacter inhibens 2.10
Pathway
pgl00300
Lysine biosynthesis
pgl01100
Metabolic pathways
pgl01120
Microbial metabolism in diverse environments
pgl01230
Biosynthesis of amino acids
Module
pgl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PGA2_c34600 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgl01002
]
PGA2_c34600 (dapE)
Enzymes [BR:
pgl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PGA2_c34600 (dapE)
Peptidases and inhibitors [BR:
pgl01002
]
Metallo peptidases
Family M20
PGA2_c34600 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AFO89418
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Position
3746810..3747967
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AA seq
385 aa
AA seq
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MTHSPLDPQQLTADLIRCASVTPEEGGALVLLDKVLSAAGFTCTRVDRGEVSNLIARWGD
KGHPRTMGFNGHTDVVPVGDTNAWTVDPFGAEEKDGFLYGRGATDMKSGVAAFVAAAIDL
VQTTPPDGAILLTITGDEEGDAIDGTTALLDHMDREGEQMAVCLVGEPTCPDEMGEMIKI
GRRGSLSAWFTVTGVQGHSAYPHRAKNPLNAMVRLMDRLASHELDQGTEHFDASTLAVVT
IDTGNPATNVIPAQTRSTVNIRFNDAHTGAELSDWLRAEAARAAKDFGVDIAVEIKVSGE
SFITPPGPLSDLVSAAVETETGRKPQLSTTGGTSDARFVKNHCPVVEVGLVGKTMHQVDE
RVEIAQIHQLKSIYGRILRDYFDQN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattcgccactcgacccgcaacagttgaccgccgatctgatccgctgtgcctct
gtcacaccggaggagggcggtgcgctggtccttctggacaaggtgctgagtgcggctggc
tttacctgtacccgtgtggatcgtggcgaggtcagcaatctgattgcccgctggggtgac
aaggggcacccgcgcaccatgggcttcaatggtcataccgatgtggtgccggtaggtgac
acgaatgcctggaccgttgacccttttggtgccgaggagaaagacggttttctctatgga
cgtggggcgactgacatgaaatcgggcgtcgccgcctttgtggctgcggctattgatctg
gtgcagaccacaccgcccgatggggccattctcctgaccatcaccggagacgaagaaggt
gatgccatcgatggcacgaccgcgttgctggaccacatggaccgcgagggcgaacaaatg
gccgtctgtctggtgggagagccgacctgccccgatgagatgggtgagatgatcaagatc
gggcgtcgcgggtcgctgtccgcctggttcacggtcaccggcgtgcagggccattcggcc
tatcctcaccgcgccaagaacccgctgaatgctatggtgcgcctgatggaccgccttgcc
agccacgagttggatcagggcacggagcattttgatgcctccacccttgcggtggtgact
atcgataccggcaacccggctaccaatgtcattcccgcgcagacgcgctccacggtcaat
atccgttttaacgatgcccataccggcgcggagctcagcgattggctgcgcgcagaagcg
gcgcgtgcggcaaaggattttggtgttgatatcgcggtggaaatcaaagtctccggcgag
agtttcatcacgccgccagggccgctgtccgatcttgtcagcgccgcagtcgagaccgag
accggtcgcaaacctcagctgtccaccactggcgggacctcggatgcgcggtttgtcaaa
aaccactgcccggtggttgaagtaggtttggtcggaaaaacgatgcatcaggtcgatgaa
cgggtggaaattgcccagatccaccagctcaaatcgatttatggccgcatcctgcgcgat
tatttcgaccaaaactga
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