Paenibacillus glucanolyticus: A3958_02260
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Entry
A3958_02260 CDS
T09937
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pglu
Paenibacillus glucanolyticus
Pathway
pglu03030
DNA replication
pglu03410
Base excision repair
pglu03420
Nucleotide excision repair
pglu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3958_02260
03410 Base excision repair
A3958_02260
03420 Nucleotide excision repair
A3958_02260
03440 Homologous recombination
A3958_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pglu03032
]
A3958_02260
03400 DNA repair and recombination proteins [BR:
pglu03400
]
A3958_02260
Enzymes [BR:
pglu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3958_02260
DNA replication proteins [BR:
pglu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A3958_02260
DNA repair and recombination proteins [BR:
pglu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A3958_02260
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3958_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
DUF61
Motif
Other DBs
NCBI-ProteinID:
ANA78892
LinkDB
All DBs
Position
complement(503363..506023)
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AA seq
886 aa
AA seq
DB search
MDKLILIDGNNIIYRAFFAMPPLTNASGQQTNAVYGFTTMLLRVIEEHKPTHMMVAFDAG
KETFRHADYQDYKGGRQKTPPELSGQFPLLKELLKGLGVPQFEIGGYEADDIIGTITRQA
DEAGRKVMVVSGDKDMLQLASEHTTIAMVRKGVTDIEYYGPEQIKERYDLTPEQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLHEFGSVEAVISRTDELKGKMKEKIEEHADSAILSKK
LATIFREVPLEQSLDDMAFAGLNEETAGPALAKLEFKSLIERLNLSTSGISGDAAEAKPE
AKIDVAIVGTKELAGVADILEHVTMLHVETHGDNPHHAEVIGIALATAERQYYIPFDVLK
SEEAEPVRAWLADSEIQKRGYDLHRIDLALHWQGIAFAGAAFDVHLAAYLLDPTESNQSL
SGLASKYGLAYLQADEDVFGKGAKYKVPELEKLSEHMARKCLAVTELVPVQEKELAANEM
LPLFHDLEMPLSRILADMEKQGIAVNAEALKELGREFEGQIDKLVKEIYEIAGTEFNLNS
PKQLGEILFVKLELPVIKKTKTGYSTDAEVLEKLAPYHDIVRLILQYRTLAKLQSTYVEG
LLKEISAQTGKVHTYYRQTIAATGRLSSQYPNLQNIPIRLEEGRKLRKVFVPSEPGWSIL
AADYSQIELRVLAHISDDERLKEAFVQDMDIHTKTAMDVFGVGVDEVDSNMRRSAKAVNF
GIVYGISDYGLSQNLNITRKEAAAFIDQYFEVFQGVRRYMDVIVKQAKQDGYVKTLLERR
RYLPEINASNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALHERQLKSRMLLQVHD
ELVFEVPEDELEVMKELVPEVMSHALKLSVPLKSEVSYGENWYEAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgattctaattgatggaaataatatcatttaccgtgcattctttgcaatg
ccgccgcttacgaatgcaagcgggcagcagacgaatgcggtttacggttttaccaccatg
ctgcttcgggtgattgaagagcataaaccgacacatatgatggtagcttttgatgctggc
aaggaaacgttccggcatgcggattatcaggattacaagggtggacgtcagaagacaccg
cctgagctgtcgggacaattcccgctgcttaaagagctgcttaagggcttgggtgtcccc
caatttgaaatcggcggttatgaggcggatgacatcatcggcaccattacccgtcaggct
gatgaagctggccgtaaagtgatggttgtatcgggagataaggacatgcttcaactggct
tcggagcatacaacgattgccatggtccgcaagggtgttacagatatcgagtattatgga
ccggagcagatcaaggagcgttacgatctgacccctgaacagattatcgatttaaaaggg
cttatgggcgatgcttccgataacataccaggggttccaggcgtgggcgagaaaacagcg
ctgaagctgctgcatgaattcggctcggtagaggctgtgatctcgcggaccgatgagctc
aagggcaagatgaaggagaaaattgaagagcatgcggattccgccattctcagtaagaag
ctggctacgatcttccgcgaggttccgctggagcagtcgctcgatgatatggcgtttgca
ggcttgaatgaggaaacggccggacctgcgctggcgaagctggagttcaaatccctgatt
gaaaggctgaacctgagcacgagcgggatcagcggtgatgcagcggaggcgaagccggaa
gcgaagattgatgtggcaattgtaggcacgaaggagctagccggcgttgctgacattctt
gaacacgtgactatgctgcatgtcgagacgcacggagacaatccccatcatgcagaggtg
atcgggattgcgctggcaacagcggaacggcagtactatattccgtttgacgttctgaag
tcggaggaggcggagcctgtccgtgcttggcttgctgatagtgaaatccaaaaacgcggt
tatgatttgcatcggattgatctggcgctccactggcagggcattgcttttgcaggggcg
gcatttgatgtccatctggcggcctacctgctggatccgacggaatcaaatcagagcctc
agcgggctggcttccaaatacgggctcgcgtatcttcaagccgatgaggatgtgtttggt
aaaggggcaaaatacaaggttcccgagctggagaagcttagcgaacatatggctagaaaa
tgtttggccgtcacggagcttgtcccggtacaggagaaggagctggcagcaaatgaaatg
cttcctctcttccatgatctggagatgccgctttcccgcattcttgccgatatggagaag
caggggattgccgtgaatgcggaagctctgaaggagttggggcgtgagttcgaggggcag
atcgacaaactcgttaaagagatttacgagattgccggaacagaattcaacctgaattcg
cctaaacagctgggagaaatactgtttgtcaaattggagctgccggtcatcaagaagacc
aaaaccggttattccaccgatgctgaagtgctggagaagctggcgccttatcatgatatc
gttcgcctgatcctgcagtatcgtaccctggctaaactgcaatctacttatgtggaaggc
cttctgaaggaaatctcggcacagaccgggaaagtacacacatattaccgtcagacaata
gctgcgacgggccgtctgagcagccaatatccaaatttgcagaacattccgatccgtctg
gaggaagggcgcaagctgcgtaaagtttttgtgccgtcggagcccggctggagcattctg
gctgccgactattcccagatcgagcttcgtgtgcttgcgcatatttcggatgatgagcgg
ctgaaggaagcctttgttcaagatatggacattcacaccaagactgcgatggatgtgttt
ggagtcggcgtggatgaggtggattcaaatatgcgccgatccgccaaggcggttaacttc
gggattgtctatggcattagcgactacggcttgtcccagaacctgaacattacccggaag
gaagctgcggcgtttatcgaccagtatttcgaggtgtttcagggcgtacgccgctatatg
gacgtgatcgtcaagcaggcgaagcaggacggttatgtgaagacgctgctggaacgccga
cgttatttgccggagatcaacgccagcaacttcaacctgcgctctttcgcggagcgtacg
gcgatgaatacgccgatacagggaaccgcggcggacattatcaagcttgccatggtccat
atggacaaagcgctgcatgaacgccaattgaagagccgcatgctgcttcaggtacacgat
gaattggtgtttgaggtgccggaggatgagctggaggtcatgaaggaattggttccggaa
gtcatgagtcatgcattgaagctgtcggtaccgctgaaatcggaagtcagctacggagag
aactggtacgaagcgaagtag
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