Paenibacillus glucanolyticus: A3958_02380
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Entry
A3958_02380 CDS
T09937
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pglu
Paenibacillus glucanolyticus
Pathway
pglu03030
DNA replication
pglu03430
Mismatch repair
pglu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A3958_02380
03430 Mismatch repair
A3958_02380
03440 Homologous recombination
A3958_02380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pglu03032
]
A3958_02380
03400 DNA repair and recombination proteins [BR:
pglu03400
]
A3958_02380
Enzymes [BR:
pglu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A3958_02380
DNA replication proteins [BR:
pglu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A3958_02380
DNA repair and recombination proteins [BR:
pglu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A3958_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Herpeto_peptide
Motif
Other DBs
NCBI-ProteinID:
ANA78916
LinkDB
All DBs
Position
complement(528666..532409)
Genome browser
AA seq
1247 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARIGDLVREAAVLGMKSLALTDHGVMYGAIPFYKACLAQGI
KPIIGCEAYITAGSRKERGSRKDQPIYHLILLAKNEVGYRNLMKLCSIGHLEGYHYRPRI
DMEALAAHHEGIICLSACLGGEVPQHLLHGREAEAKAAALRYQAIFGDDYYLELQDHGIP
EQKRVNPQLIALSRETGIPLVATNDVHYLTEEDAEVQDVLICIGTGKTVEDEDRLQIQTN
QLYLKSGSEMERLYPHVPEAIQNTAKIADQCNLELEFGKSILPEYSSLPEGKNAAEYLRE
LCLNGLQERYGITERWQDEALRSELEQRLNYELGVIENMGFSDYFLIVWDFIAYAHRQGI
AVGPGRGSSAGSLVAYTLQITNVDPMKYKLLFERFLNPERITMPDIDIDFSDERRDEVID
YVVDKYGKEHVAQIITFGTMAARAAVRDVGRALNVPFGDVDKAAKLIPNHLGISIAKAME
QSPQLKEQYETRPKVRELIDMAMKVEGMPRHASTHAAGIVISRDPLTDAVPLQEGSEKTA
LTQYSMENLESVGLLKMDFLGLRTLSIIERTLKWIQELTGGALDFEQIPDNDGNTYEMLG
RGETTGVFQLESAGVRRVLKDLKPSAFEDIVSVVALYRPGPMEFIPRFIQVKHGQIDPEY
PHEDLIPILGDTYGIIVYQEQIMQIASTMAGFSLGEADLLRRAVSKKKREVLDRERSHFV
SGSLKLGYSEDEANRVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVPFMASMLT
AVMGSHRKVAEYVLEARRIDIEVMPPDVNESGTYFTPVVSQSESASLDEGSHHFTEGGIR
FGLAAIKNVGTQAVENIVEIRREKPFESLLDFCRRVDLRVCNKRVIESLIQAGAFDSLPG
HRSQLVAMLDETVEAAVKWRKERDDLQIQLFDFVEATNWDIEYPDIPPYTASQQLEFERE
LLGMYLSGHPLDGYEDTLTESGADRLMDLHEAADESMAAVAGMVVTLKTITTKQGKAMAF
MECEDQIERCEVVLFPEVWKRSAHLIEKGALLAIRAKVQLQDEGFKLLAEEVAPLEAQTL
RQLVQRSKVRGAAGGGRGKAGGPGSGSGGAGRSGPGPSGAQPVSTAVPSAEPVAAPVSTM
NGGETNPSGNEAVNNRQASEKDSRTDTANPKAEQRVFVKITADAEQSELLVKLKELLQRH
PGPVATVLFYERSQKVLALSDAYRIKPSKELFAEMEGMLGQDTVKVK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttcgtgcatttgcacgtgcatagcgaatacagtttgctcgatggagcggca
cgtatcggtgacctggtgcgggaagcggcagtgcttggaatgaaatcgctggcgctgacg
gatcatggcgtgatgtatggggccattccattctataaagcctgcctggcgcagggcatt
aaaccgattattggctgcgaagcctatattacggcgggttcccgcaaggaacggggcagc
cgcaaggatcagccgatctatcatttgattctgctcgccaagaatgaggttggctatcgc
aatttaatgaagctctgttcgatcgggcatctggagggttaccattacagaccccgaatc
gacatggaggcgctggctgcccatcatgaaggcatcatatgcctcagtgcttgcctggga
ggcgaggtcccgcagcatctgcttcatggacgtgaagcggaagccaaggcagcagcgctt
cgttaccaggcgatattcggagatgactattacctggagctgcaggatcacgggattccg
gagcagaagcgcgtcaatccgcagctgatcgcgctcagccgtgagacgggtattccactc
gtagctaccaatgatgtgcattacctcacggaggaagatgccgaggttcaagacgttctg
atctgtatcggtacgggcaaaacagtggaggacgaggaccggctgcagatccagaccaac
cagctgtatctcaagagcggcagtgaaatggagcgtctgtacccccatgtgccggaagcg
atacagaatacagccaagattgcggaccaatgcaatctggagctcgaattcggcaaatcg
attttgccggagtacagctctctccccgagggaaagaatgctgcggaatacctgcgcgag
ctttgcctgaacggactgcaggaacgctacgggattacagaacggtggcaggatgaggca
cttcggagtgagctggagcagcgtctgaattatgagctcggcgtcatcgagaatatgggc
ttcagcgactattttctgatcgtatgggactttattgcttacgcccacagacagggcatc
gcggttgggcccggcaggggctcgtcggcgggaagcttggtcgcttacacccttcagatt
acaaatgttgacccgatgaaatataaattgttgtttgaacgcttcctgaacccggagcgg
attacgatgcccgatattgatatcgacttcagtgacgagcgccgggatgaggttatcgat
tatgtggtggataagtatgggaaggagcatgtcgcccagatcatcacgttcggtacgatg
gcggcaagggcggctgtacgcgatgtcggccgtgcgctgaatgtgccgttcggggatgtg
gacaaagcggccaaactgattcctaaccatcttggcatcagtattgccaaagcgatggag
caaagcccgcagctgaaggagcagtacgaaacaaggccgaaggtgcgcgagctgatcgac
atggcgatgaaagtggaaggtatgccgcgccatgcttcgacgcatgccgcgggtatcgtt
atttcacgcgatccgctgacggatgcggtgccgctgcaggaaggcagcgagaagacagcg
ctgacgcagtattccatggagaatttggagagcgtgggccttcttaagatggattttctg
ggtctgcggacgctgtccatcatcgagcggacgctgaaatggattcaagaattgaccggc
ggggcgcttgatttcgaacagataccggataacgatggcaacacgtacgaaatgctgggg
cgcggcgaaaccacgggcgtatttcagcttgagtccgcaggtgtaaggcgggtgctgaaa
gatctgaagccttcggcgtttgaggatatcgtatccgtggtcgccttgtatcgaccaggt
ccgatggaatttataccaaggtttatccaggttaagcacggccagatagatcctgagtac
cctcatgaggatctaattccaatacttggcgatacttatgggatcattgtctatcaagag
cagatcatgcagattgcctcgacgatggcgggcttctctctcggggaggcggatctgctt
cgccgagcggtatcgaagaaaaagcgcgaggtgctggaccgggagcgcagccacttcgtt
tcgggcagcctcaagcttggctatagcgaggatgaagctaaccgcgtgtacgatatgatt
gtgcggtttgcgaactatggatttccacgtgcgcatgctgccgcctacggcgtgctcgct
ttccagacggcttatctgaaggcacattatccggttccattcatggcttccatgctgacc
gccgttatggggagtcaccggaaggttgcagaatacgtgctggaggctcgccgcatcgat
attgaagtgatgccgcccgatgtcaatgaaagcgggacatattttacgccggtcgtaagc
cagtctgaatccgccagcctggatgaaggaagccatcatttcaccgaaggcggcattcgc
tttgggcttgcagccattaagaacgtgggcacccaagcggttgagaatatcgtagagata
cgccgcgagaagccatttgaaagtctgctcgatttttgccgccgcgtagacctccgcgta
tgcaacaagcgcgtgatcgagtcactcatccaggccggggccttcgattccttgccgggt
caccgctcccaactggtggccatgctggatgagacggtggaggcagctgtgaagtggcgt
aaagagcgggacgacctgcaaattcagctgtttgactttgttgaagcaaccaattgggac
attgaatatcctgacatcccgccttatacggcaagtcagcagctcgaattcgagcgtgag
cttctgggtatgtatctgtccggccacccgctggatggatatgaagatacactgacggag
tcgggggccgaccggctaatggaccttcatgaagcggcagacgaatcgatggctgccgtg
gccggtatggtggttacgctgaagacgattacgaccaaacagggcaaagcgatggccttc
atggaatgcgaagaccaaatcgagcgctgcgaggttgtgctctttcctgaagtatggaaa
cgaagcgcgcatctgattgaaaaaggcgccctgcttgccatacgggccaaggtacagctg
caggatgaaggtttcaagctgctggccgaagaagtggcgccgcttgaagcgcagacgctg
cgtcaactggtccagcggagcaaggtccgtggagcagcaggcggcggcaggggcaaagcc
gggggaccaggatcaggcagcggcggggctggaagatcgggtccgggtccgtcaggagca
cagccggtttccaccgcagtgccatcggcagagccggtcgcggccccggtgagcaccatg
aatggcggtgagacgaacccgtctggaaacgaagccgtaaacaaccgccaagcgtccgag
aaggattctcgtacagacacagcgaatcctaaggctgagcagcgcgtgtttgtgaaaata
acagccgatgccgagcaatcagaattgctggtgaagctgaaagagctgctgcagcggcac
ccgggacctgtcgcaacggtgttattttacgagcggagccaaaaggtccttgcacttagc
gatgcctaccggattaagccctcgaaggagctttttgctgaaatggagggcatgctggga
caagacaccgtcaaggtaaaatga
DBGET
integrated database retrieval system
