Paenibacillus glucanolyticus: A3958_17310
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Entry
A3958_17310 CDS
T09937
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pglu
Paenibacillus glucanolyticus
Brite
KEGG Orthology (KO) [BR:
pglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pglu03400
]
A3958_17310
Enzymes [BR:
pglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3958_17310
DNA repair and recombination proteins [BR:
pglu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A3958_17310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
nSTAND1
AAA_29
AAA_22
nSTAND_NTPase5
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ANA81619
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All DBs
Position
3877118..3880648
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AA seq
1176 aa
AA seq
DB search
MSVQFVIGRSGSGKSTLIRQEMMDQLERDPRGNPMILIVPEQGSYEAEHALVNAGGIRGM
MRAQVLSFRRLAYRVMQETGGAAKVAISEEGKRMLMYKILRRRKEELQLFGASGEQLGFV
GKLSELYTEMKRYCIDASCVEEQLSQMMSGSGNSPMLRRKLEDIVTVFRDFELEISRLYT
DEEDTLASLAEGVADSEYIKRADIWIDGFHGFTPQEYRVLGELIHHANHVTIALTLDKPY
MDGAVPHELDLFHPTAVTYIKLKGIADELGMDAEHHMLHPEVPPRFQDSPVLAHLERGYD
RKKRWTGAYGDGNHEDKENGRREGLLLHAASHRRAEIEGALREMLRLAQEEGARFREMAV
FVRNMGDYEHLVGPLFKEYDIPYFLDQKRSELHHPLVEFIRSALDVIGRRWRYEDVFRCV
KTDLLLPLDGSLNREDMDRLENHVLASGIHGYRWTDGRPWKGIPSLSLEDGENEVLNLDG
MQAIEYARRVIAEPLHAFEKRMKKAATAMDQSTAVYRLLEECDVPEKLELLSRAALDAGR
PEEAREHRQVWGAVLDLLDQIVEMMGAEKLSTELFTGVLDTGLTEMKMALVPPSLDQVLI
GSMDRTRTGGVKYAFLLGINDGVLPAQFQDDGILTEPERLHLEDRGLELAPSISRRLLDE
RFLIYNALTSASEQLWVSYPAADDEGKTLLPSEVIRHLKLMFQIDETPLYPRPHAGQSVP
EQERYAARPDKTLAYLTGRLRDWRNGEDIPHIWWHMYNWFAQKPEFRPRLESMLSSLSYR
NEAQPLKEETSRQLYGTKLRTSVSRMERFVACPFSHFASHGLKLRERQLYRLQAPDIGQL
FHAALSSMAVKFQSEHRSWGDLSADECLREAEATVDRLAPMLQGEILLSSKRYGYISRKL
KNIVGRASVILGEQARRGKFEPIGLELDFGPGKPLPPLTFELLNGVKMEVVGRIDRVDMA
RGEHGIMLRVIDYKSSQKDLRLHEVYYGLSLQMLTYLDVLLTFAEDWLGEQALPAGTLYF
HVHDPVLQSANGMTPEQAAEELLKRYKMKGLLLADREAVSLMDSSLEKGHSAILPVAVKT
DGSFYSSAAVATPDQWETLLSAVRENMLTIGSRITGGDVAIEPYRIQQETACTYCSYRPV
CQFDDAIEGSDYQLLGKPGRDQVWDLLGHSKGGESR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcaatttgtgatcggaaggtcaggcagcggcaagagcacattgatccgtcaa
gagatgatggatcaactggagcgggatcccagggggaatccgatgattctgatcgttccg
gagcaggggtcctatgaagccgaacacgcactcgtgaatgcgggaggcatacggggcatg
atgcgtgcgcaagtgctcagtttccgccgattggcctaccgggtcatgcaggagactggc
ggagcagcgaaagtggcgatcagtgaagaaggaaaacgcatgctgatgtataaaattttg
cggaggcgcaaagaagaactgcagctattcggcgcctcaggcgagcagctcggttttgtc
ggtaagctgagtgagctctacacggaaatgaagcgatactgcattgacgcttcctgtgtg
gaggagcagctgagccagatgatgtcgggctccggaaattctccgatgcttcgccgaaag
ctggaagatatcgtaactgtattccgtgatttcgaactcgagatatcgcggctgtacacg
gatgaggaagacacactcgcctcactggcggagggcgtggcggactcagaatacatcaag
cgtgccgacatctggatcgatggcttccatggctttaccccgcaggagtatcgggtgctc
ggggagcttatccatcatgccaatcacgtcacgatagctctgacactcgacaaaccttat
atggatggggctgttccacatgagctggatttgtttcatcctaccgcggtgacgtacata
aagctgaaaggaattgccgatgagttgggaatggatgcggaacaccatatgctgcatcct
gaagtgccgccgcggtttcaggattccccggtgctggcgcatcttgagcgcggttatgac
cggaagaagcgctggacgggagcttatggagacgggaatcatgaggacaaggagaacggc
cgcagagaagggctgcttcttcatgctgccagccatcgccgggccgaaatcgaaggggca
cttcgagagatgctgcgcttggcgcaggaggaaggagcgagattccgggagatggcggta
ttcgtccggaatatgggagattatgagcatctggtaggcccgttattcaaggaatacgat
attccttattttctggatcagaagcggagcgaactgcaccatccgttagttgaattcatt
cgctcggctctggatgtcattgggcgaagatggcgttatgaggatgtgttccgctgcgtg
aagacggatttgctgcttccgctggacggctccctgaaccgggaggatatggaccggttg
gagaatcatgtgctcgcttccgggattcatggttaccgctggacggatggccgtccgtgg
aaggggattccaagtctctctctagaggatggagaaaacgaggtgctcaatctcgacggc
atgcaggctattgaatacgcaagaagggtcatcgcagagccgcttcatgcgttcgagaaa
cggatgaaaaaggctgcgaccgccatggatcagagtacggcagtttatcgccttctggag
gagtgcgatgtacctgagaagctggagctgctcagccgggccgcgttggacgcaggacgt
ccagaggaagccagggagcatcgccaggtatggggagccgtgcttgacctgcttgaccag
attgtggagatgatgggtgcagagaagctgagcacggaattgtttacaggggtgctggat
acgggtctcactgaaatgaagatggcccttgtaccaccctctctggatcaggtgcttatc
ggaagcatggaccggacacgaacgggcggggtgaagtatgcttttctgctcggcattaac
gatggcgttcttccagcccagtttcaggatgacggcattttgacagagccggagcggctc
catctcgaagatcgcgggttggagcttgccccgagtatatcccgcagactgctggatgag
cgcttcctgatctacaacgcgcttacttcagccagcgagcagctgtgggtcagctatcct
gctgcagatgatgaaggcaagacgttattgccttccgaggtgatccgtcatctgaagctg
atgttccagatcgacgagacacccctgtatccaaggccgcatgccgggcaatcggttccc
gaacaggagcgttatgcggcccgcccggacaagacgcttgcatatttaacgggcaggctt
cgcgactggaggaatggagaggacattccgcacatttggtggcatatgtacaattggttt
gctcagaagccggaatttcggccgcgtctggaatcgatgctctcttcattgtcctatcgg
aatgaagcgcagcctcttaaggaagagaccagcaggcaattgtatggaacgaagctgcgg
acaagcgtatcccggatggagcggtttgtagcctgtccattttcacattttgcatcacat
ggattaaagctgagagagcggcagctgtaccgactgcaggctcctgacatcggacagctg
ttccatgctgccttgagcagcatggcagtgaagtttcaatcggagcatcgaagctgggga
gacctgtcggcagatgagtgtctgcgtgaggcggaggctaccgtggatcggctcgctccg
atgctgcagggcgaaatcttgttgagctccaaacggtatggatatatctcccggaagctg
aagaatatcgtgggcagagcttccgttattttgggtgaacaagcccggcgcggcaaattc
gagccgatcggccttgagcttgacttcggtcccggcaaaccgctgccgccgctgacgttt
gaactgcttaacggggtgaagatggaggttgtcggtcgtattgaccgggtggatatggca
cgtggcgagcatgggatcatgcttcgggtcattgattataaatccagccagaaggatctg
cgattgcatgaggtctattacggattgtccttgcagatgctgacctatctggacgtgctg
ctgacgtttgcggaggattggcttggcgaacaggcattgcctgcaggaacgctgtatttc
cacgttcatgatccggtattgcaatccgcaaacggcatgacgccggaacaggcggcagag
gaactgctcaagcgctacaaaatgaaaggtctgctgcttgcagaccgtgaagccgtttcc
ctcatggattcatcccttgaaaaaggccattcggctattctgcccgttgccgtcaaaaca
gacggcagcttctacagcagcgcagccgttgcgacgccggatcagtgggagactttgtta
tccgcagtgcgggaaaatatgctgacgatcggctccagaattaccggcggcgatgtagcg
attgaaccttaccgaatccagcaggaaacagcttgcacgtactgttcctaccggccggtg
tgtcagttcgacgatgcgattgagggcagcgactaccagctgctgggcaagccgggacgc
gatcaggtctgggatctgctgggacattcgaagggaggagagagtcggtga
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integrated database retrieval system
