Paenibacillus glucanolyticus: A3958_17315
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Entry
A3958_17315 CDS
T09937
Name
(GenBank) ATP-dependent helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pglu
Paenibacillus glucanolyticus
Brite
KEGG Orthology (KO) [BR:
pglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pglu03400
]
A3958_17315
Enzymes [BR:
pglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3958_17315
DNA repair and recombination proteins [BR:
pglu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A3958_17315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_12
LemA
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANA83456
LinkDB
All DBs
Position
3880654..3884766
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AA seq
1370 aa
AA seq
DB search
MIAKPEGSMWSDDQWKAIALSGDDILVAAAAGSGKTAVLVERIIRKILDDTTGFSVDRLL
VATFTKAAAAEMRGRIREALERELDRDPDNEHIRRQLALLGRASITTLHSFCMEVIRRYY
QLIPLDPGFRILNEHEADLMRQDMLEELFEEKYGEVEQDQGSTFLRLADWFSGERTDDAL
YRLVQRLYDFSRSHSWPASWLRDTAASFQVADTEALGQTAWVQSVLADARLALNGAAGLL
LQAKTIAMQPGGPAPYVDNLNEDLSLVASLLEAIDSSPWESLYGIFREVSFGKLKSVRKD
DVLPELQERVKELRDHVKKTVNELKSALFGRPASEFLQELHTAAPLMQELAETVVSFGER
YREAKASKGLVDFNDLEHYCLHILRHPDSVPGHMMPSDAAMEYREQFDEVLLDEYQDTNS
VQEDIVRLISREAPGNRFMVGDVKQSIYRFRLAEPGLFLDKYKKFSSDVNTSLVGMRIDL
ARNFRSRMEVVNAVNVLFRQIMNESVAEIAYDERAELISGASFPEREDTGGMSPYTPELL
LIDRLGKGAEEPSEESASEEDGGMMEVEVLEMETAQLEARAIARRIREMTGESGKPLMVY
DKALKSMRPAGYGDMVILLRSAMVWASLIIEELRQEGIPAFGEQNKGYFQATEVEIILSL
LQVIDNPRQDIPLASVLRSPILGLSEEEMAQVRLCAKGTYYDALKAAAALGGLAPVLDSE
RSLGLVDGKWTPGTELESMAEAAAGHELVAGSSSSASMRMNGPNVEISTELGTKLGLFMD
RLRRWRQEARQGSLSELIWGIYSETGYLDWIGGLPGGKQRQGNLTALYDRAVQYEQDTSS
RGLFRFLTFVSRLRERGGDLGTAGGTDSQGNAVRLMTIHKSKGLEFPVVFVAGLSKNFNQ
QDLNSPFLMHKELGFGPKFVDEGMRVSYPTLPNLAIRRRSQLELLAEEMRVLYVALTRPK
EKMILVGTVKDLPKKVSAWAQADHNPELLLPDYVLARGRSYLDWIGPAVIRHPSATLLRE
MAGLPVEGNLGVLAEDQSEWLFSIETPESLAQGMSGIADDVQADSLDRKNKLKALHKLEP
VELDSATAQQEEAVSDHQREAIDRRLSWSYRYEAVSQISAKTSVTEMKKLLTLQDSPSLD
LIEEQAVKRQSQEDIGLGASFTLNLRRPKFMESAKLTPAERGTVYHTIMQHLPLQRLGGA
AEQISEIEQTIRYLVEKEIITGEQAAVVEPAEISSLFDCAVGKQLLEAEDTWREMPFSYA
LPAAEAYQGLAFIDQIAEQTASDHPHVQLLQDETVLIQGVVDCLFRHNGRLVLLDYKTDR
VLEHRGGIPALAEQYRFQLDLYAKALEDILGEPVYEKWLYFFDGGQAVQV
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaaagcctgagggcagcatgtggagtgatgaccaatggaaggccattgcactt
tcgggtgatgacatcctggttgcagccgcagcaggctcaggaaaaaccgccgtgctcgtt
gagcggatcattcgcaaaatccttgacgacaccacagggttcagtgtggaccggctgctt
gtggctacctttaccaaggcagcggcagccgaaatgcgcggtcggattcgggaagcgctt
gaacgcgagctggaccgtgacccggacaacgagcatatccggcgccagctcgctttactc
ggcagggcgtcgattacaacgctgcactccttctgcatggaagtcatccgccggtattat
cagctgatcccgctggatccggggttccgcattctgaatgaacatgaggcggatttgatg
cggcaggatatgttggaggagctgttcgaagagaagtatggtgaagtagagcaggaccag
ggcagtacgtttctccgtttggctgattggttcagcggggagagaacggacgatgcactg
tatcgtctcgttcagcgcctctacgatttctcgcgcagtcattcatggccggcaagctgg
ctgcgagacacagcggcaagcttccaggtagcggataccgaggcgctcggacaaacagcg
tgggttcagagtgtattggctgatgcacgtttagcattgaacggagctgcaggcctgcta
ttgcaagcgaaaaccatcgctatgcagcccggggggccagcaccgtatgtggataatctg
aatgaggatttgtcgctggtggcctctttgcttgaagccatcgattcttcaccgtgggaa
tcgttatacggtatttttcgcgaggtttcttttggcaagctgaaatcggtcaggaaggac
gatgtcctgcctgagctgcaggaacgggtcaaggaacttcgggaccatgtgaagaagacc
gtaaatgagctgaaaagcgccttgttcggccgaccggcatcagaatttctgcaggagctg
catacggctgcgccgctgatgcaggaactggccgagacggttgtttcctttggcgagcga
taccgggaggccaaggcatcaaaaggcttggtcgactttaacgatctggagcattactgc
ctacatattcttcgccatccggattccgtgccgggtcatatgatgccctccgatgcggcg
atggaatatcgcgagcagtttgacgaagtgctgctggacgaatatcaggatacaaacagt
gtgcaggaagatatcgtacgattgatatccagagaagcgccgggaaatcggtttatggtt
ggagacgtcaagcagagcatctaccgtttccgcctggcagagccgggactttttcttgat
aaatacaaaaaattctcctcggacgtcaacacgtcccttgtgggcatgcggattgatctg
gctcgaaattttcgaagccggatggaagttgtgaatgctgttaatgtgctgtttcgacag
atcatgaatgaatccgtagcggagatcgcctatgacgagcgcgcggagctgatatccggc
gcttcctttcccgaacgcgaggatacagggggcatgagtccttatacgccggaattgctt
ctcatcgaccgtctcggaaagggtgcggaggaaccgtccgaagaatcggcttcggaagag
gacgggggcatgatggaggttgaggtgcttgagatggaaaccgcccaactggaagctcgt
gccattgcccgcagaatccgtgagatgaccggcgaaagcggaaagccgctcatggtttac
gataaggcactgaaatcgatgcggcccgccgggtatggagatatggtcattttgctgcgt
tctgccatggtatgggcgtctctaatcattgaggagctgcgacaggagggaattccggcg
ttcggcgagcagaacaaaggatactttcaggcaaccgaagtggagattatcttatcgctg
ctgcaggtaatcgataaccctcggcaggatattcctctggcatcggttctgcgatcgccc
attctcggtttatcggaggaagagatggcacaggtccgcctgtgcgccaaaggtacttat
tacgatgcgcttaaggcagctgctgcgttaggtggactggcgccggtattggattcagaa
cgttcattaggtctcgttgacgggaagtggactccgggcacagagctggaaagtatggca
gaagcggcggcaggccatgagctggttgcaggcagctcttcaagtgcttcgatgcggatg
aacggcccgaatgttgaaatatcaacggagctgggcacaaaactggggttgttcatggac
cggctgcggcgctggcgtcaggaggcccgtcaggggagcctgagcgagctgatctggggg
atctacagcgagaccggttacttggattggatcggcggtttgccgggaggcaagcagcgt
cagggaaatctgacagccttgtatgaccgtgcggtgcagtatgagcaggatacttcctca
aggggactctttcgttttcttacctttgtttcaaggcttcgggagcgggggggagatctt
gggactgccggcggaacggacagccaaggaaacgctgtacgtctgatgaccattcacaag
agcaaagggctggaattcccggtcgtttttgtggcggggttgtccaagaatttcaaccag
caggatttgaactcgcccttcctcatgcataaggagcttggatttggaccgaaatttgta
gatgagggcatgcgggtcagttaccccaccctgcctaatctggcaatccgccgcagatcg
cagctggagctgctggccgaagagatgcgagtgctctacgttgcgctcacacgaccgaag
gagaagatgatcctggtcggtacggtgaaggatttgccgaaaaaagtgtctgcatgggcg
caggccgatcataatcccgagctgctgctgccggattatgtccttgcccgaggccggagt
tatttggactggatcggtcctgccgtgatccggcacccttccgcgaccttgctccgtgaa
atggcagggttgcccgtagaggggaatttgggtgtgctggctgaggatcaatcagagtgg
ttgttttcgatagagacaccggaatctttggcgcagggcatgagtggaattgcggatgat
gtacaagcagacagtctggatcgaaagaacaaattaaaagctcttcacaagcttgagccg
gtagaactggattcagcgacggcgcagcaggaggaggctgtgtccgatcaccagcgggaa
gccattgaccggcgcttgtcttggagctatcgctatgaagcggtcagtcaaatttccgcc
aaaacgtctgtgacggagatgaagaaactcttgacgcttcaggacagtccctccttggat
ctgatagaggagcaggccgtgaaacgccagagccaggaagatataggacttggcgcttcc
ttcacactgaacctgaggcggccaaaattcatggagtctgcgaagctgacaccagccgag
cggggaacggtctaccatacgattatgcagcacttgccccttcaacgattggggggagct
gctgaacagatttccgagattgaacaaaccatccgctatcttgtggagaaggaaatcata
accggagagcaggctgccgtcgtggagccggcggaaatcagcagcctttttgattgtgca
gttgggaagcagcttttggaagcagaagatacatggcgtgaaatgccgttctcctatgca
ctgcctgcagcggaagcctatcaagggcttgcttttatagaccaaatcgcggaacagacg
gcgagcgatcacccgcatgttcaactgcttcaggacgagacggtgctgatccagggggtt
gtagactgcttattccggcacaatggaagacttgtgctgctggattataaaacggatcgg
gtgctggagcaccgcggcggcattccggctttggcggaacagtaccgttttcaactggat
ttgtatgcaaaggcgctggaagacattttaggcgagcctgtatatgagaaatggctgtac
ttttttgatgggggacaggccgttcaggtttaa
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