Paenibacillus glucanolyticus: A3958_26200
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Entry
A3958_26200 CDS
T09937
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pglu
Paenibacillus glucanolyticus
Pathway
pglu03420
Nucleotide excision repair
pglu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pglu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3958_26200
03430 Mismatch repair
A3958_26200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pglu03400
]
A3958_26200
Enzymes [BR:
pglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3958_26200
DNA repair and recombination proteins [BR:
pglu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3958_26200
MMR (mismatch excision repair)
Other MMR factors
A3958_26200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PhoH
SLFN-g3_helicase
AAA_30
AAA_16
DEAD
nSTAND3
ResIII
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANA83248
LinkDB
All DBs
Position
complement(5845230..5847557)
Genome browser
AA seq
775 aa
AA seq
DB search
MAISEQDWQEEQKRVTEVSTKISNKISQLEASVGDIRDVVIDMRKDFWDEVTVNFSNPDD
LGETSTNLRQQSQVLAEREHAHLQSSKLLKKYRKLVESPYFGRIDFKEEGTSETETIYLG
TGSFLDENMETFLVYDWRAPISSLYYDGAPGPAQYETPSGLVKGEMLLKRQFVIHSGQIK
VLFDTGVTIGDELLQQVLSHSADDRMKSIVATIQKEQNAVIRNDKTRMLIVQGAAGSGKT
SAALQRVAYLLYKYRETLRADQMILFSPNPLFNSYVSTVLPELGEDNMQQTTFQSYLEHR
LGKEFDLEDVFTQTETLLNADDSLRYRARLESISYKSSGAYLDTIRRYKELLEKNGMLFK
PVVFQGKVIVSSDEMTAQFYGYDSAVKLAGRIDLMKEWMLKRLSDFAQSEKDAPWVEEQI
ELLDSDDYQRAFQTMKRKQKRKEETFDDFDKEKDVLAKMVISQRLKPVRRWIKRFRYVDV
KGMYRKLFTDESLFRRAAGDPENLPAHWEDICKLTTASLDDKSLMYEDATPFLYLKELLQ
GFRTNTAIRHVIVDEVQDYSGFQLEFLKRLFPRAKMTVLGDLNQAIYAHGEALGSLENLV
SLYGKEDTEVITLTQSYRSTYEIVDFTRQMIPGGERIVPFNRPGEAPRVIQVQDEEALNG
TIISDIRELHEQGFQYVAVICRTEEESRRVHKQLSDDIHTRLITKTTPAFEKGTLVVPAY
LAKGVEFDAVIIYNGSEDVYHRESDRKLFYTACTRAMHKLHVYHIGEKSHFIPET
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagcgaacaggattggcaagaagaacagaaacgggtaacggaagtatcaacg
aaaatcagcaataaaatatctcagttggaagcgagtgtcggagatatccgtgatgtcgtt
atcgatatgcggaaggacttctgggacgaagttacggttaacttcagcaacccggatgat
ttaggtgaaacatcgaccaatctgagacagcagtcacaggtactggcagaacgtgagcat
gctcatctgcagtcaagcaagctgcttaaaaagtacagaaaactcgtggaatctccttac
tttggtcgcattgattttaaagaggaaggaacctcggagacggagactatttatctggga
accggttcttttctggatgaaaatatggagacgttcctcgtctatgactggcgcgcaccg
atatccagcctgtattatgacggagccccgggtcccgcccagtatgagacgccctccggc
ctggtgaaaggtgaaatgctgctgaagcgccagtttgtaatccatagcggccagatcaag
gtattgtttgatactggcgtgacgattggtgatgaactgctccagcaggtactcagccac
agcgcggatgaccggatgaagagcattgtagctaccattcagaaggagcagaatgcggtc
atacgaaacgacaaaacacgcatgctgatcgttcagggagctgctggcagcggaaaaacc
tcagccgcactgcagcgggtggcttatctactgtacaaataccgggagacactccgggcc
gatcagatgattctgttctccccgaacccgctgtttaacagttatgtgtccaccgtgctt
cccgagcttggcgaggacaacatgcagcaaacgaccttccagtcctatctggagcaccgt
ttgggcaaggaatttgatctcgaagatgtattcacacagacggaaactttgctgaatgca
gatgattcgctccgctaccgcgcgcgtctggagagcatatcctataaatcctccggcgct
tatctggataccatccgacgatataaagagctgcttgagaagaatggcatgctctttaaa
ccggttgtattccaaggcaaggtcatcgtcagctcggatgaaatgaccgcccagttctat
ggttatgattcagcggttaaactcgccggccggattgatcttatgaaggaatggatgctg
aaacgtctgtcggattttgcccaaagtgaaaaagacgctccatgggtcgaggagcaaatc
gagctgctggattcggatgattaccagcgcgccttccaaacgatgaagcggaagcagaaa
cggaaggaagagacgtttgacgattttgataaggaaaaggacgtccttgcaaaaatggtg
atcagccaacgtctcaaaccggtcagacgctggatcaagcgattccgctacgtggatgtc
aaggggatgtaccgtaaactgttcacagacgaatccttgttccgccgggctgcgggcgat
cctgagaatcttccggcacattgggaggatatctgtaagctcaccacagcctccctggac
gataaatcgttgatgtacgaagatgctaccccgttcctgtacctgaaggagctgctccag
ggtttccgtacgaacaccgccattcgtcatgtgattgtcgatgaggttcaggactattcg
ggtttccagctggaattcctgaagcgattgttccctcgggccaaaatgacggtactcggt
gatcttaatcaagcgatttatgcgcatggggaggctctgggaagcttggagaacttggtc
agtttgtatggtaaagaggatacggaagttatcaccctgacgcaaagttaccgctccacg
tatgaaatcgttgatttcactcggcaaatgattcctggaggagagcggatcgttcccttt
aaccgtccgggtgaagcgccgcgggtgattcaggttcaggatgaagaagcgctgaacgga
acgattatttccgatatacgtgagcttcatgagcagggattccagtacgtcgcggtcatc
tgtcgaacggaagaagagagccggcgtgtgcacaagcagctgtcagatgatattcatacg
agattgatcaccaagacgaccccggcatttgaaaaaggaacccttgttgttcccgcctat
ttggcaaagggtgtcgaattcgatgcggttatcatttacaacggttccgaggacgtgtat
caccgggaaagcgaccggaagctgttctataccgcctgcacacgtgcgatgcataaactg
catgtttatcatatcggggaaaaaagccattttatcccggaaacttga
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