Paenibacillus graminis: PGRAT_00405
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Entry
PGRAT_00405 CDS
T03325
Name
(GenBank) pyridoxal biosynthesis protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00750
Vitamin B6 metabolism
pgm01100
Metabolic pathways
pgm01240
Biosynthesis of cofactors
Module
pgm_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
PGRAT_00405
Enzymes [BR:
pgm01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
PGRAT_00405
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Motif
Pfam:
SOR_SNZ
ThiG
IGPS
TetR_C_27
NMO
His_biosynth
NanE
Motif
Other DBs
NCBI-ProteinID:
AIQ66287
UniProt:
A0A089LZD8
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Position
88172..89053
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AA seq
293 aa
AA seq
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METGTSRVKRGMAEMQKGGVIMDVMNAEQAKIAEAAGAVAVMALERVPSDIRAAGGVARM
ADPTIVEEVIKVVSIPVMAKARIGHYVEAKVLESLGVDYLDESEVLTPADEVFHINKREF
TVPFVCGAKDLGEALRRINEGASMIRTKGEPGTGNIVEAVRHMRYINSQIRKVTNLSLDE
LYNEAKTLGVPYELLLEVHELGKLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFKS
DNPEKFARAIVEATTHFTDYKLIAEVSKNLGTPMKGIDIASLSPAERMSERGR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaggaacatcgcgagtaaaaagaggcatggcagaaatgcaaaaaggcggcgtc
attatggacgtcatgaatgcagaacaggcaaaaattgctgaggctgcgggagcagtagcc
gttatggcgctggagcgcgtcccttctgatattcgcgcagcaggcggtgtggcccggatg
gccgaccctaccattgtggaagaggttatcaaggtagttagcatccccgtgatggccaaa
gcccgtatcggacattatgtagaagcgaaggttctggagtccctgggcgtggattatttg
gatgagagtgaagtgctgactcccgctgatgaggtgttccatattaacaagcgtgaattt
actgttccgtttgtatgtggagccaaagatctgggtgaagcactgcgccgtatcaatgaa
ggtgcatccatgatccgtaccaaaggcgagccgggaaccggcaacattgttgaagctgta
cgccatatgcgttatattaacagccagatccgtaaagtaaccaatctttcattggacgag
ctctataatgaagccaagacacttggtgttccttacgaactgctgcttgaagttcatgaa
ctgggtaaactgccggtagttaactttgctgcaggcggtgtggcaactccggctgatgct
gctttaatgatgcatctgggagccgatggtgtttttgtgggctccggtattttcaaatcc
gataatccagagaagtttgcccgcgcaatcgtggaggctactactcactttacggactat
aaattgattgctgaagtatccaagaacctcggcaccccgatgaaggggatcgatattgcc
tcactgtcgccggcagaacgcatgtcggaacgcggccgttaa
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