Paenibacillus graminis: PGRAT_00540
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Entry
PGRAT_00540 CDS
T03325
Name
(GenBank) carboxypeptidase
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00550
Peptidoglycan biosynthesis
pgm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGRAT_00540
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pgm01003
]
PGRAT_00540
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgm01011
]
PGRAT_00540
Enzymes [BR:
pgm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PGRAT_00540
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PGRAT_00540
Glycosyltransferases [BR:
pgm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PGRAT_00540
Peptidoglycan biosynthesis and degradation proteins [BR:
pgm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PGRAT_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AIQ66313
UniProt:
A0A089M492
LinkDB
All DBs
Position
complement(111031..113103)
Genome browser
AA seq
690 aa
AA seq
DB search
MPREPVTPPKPKHRLRRLSRLLAVMSVLCVLAAGGLLGYLYHKDLPPIADDIRSKLLDSR
GNVLTTFTTDGRSREPVTLNQISPLLIQATLAVEDRKFYKHSGFDVKGMGRAVLANLESG
DRTQGASTLTQQLARNLYLSHEKTWTRKAKEALYTMQLEMKYSKDEILNMYLNQIYYGHG
AYGIEAASQMYFGKAAADLDLAESAILAGIPKGPTYYSPYTHMDNAKKRQRIILAAMTEV
GDITEAQATAARLETLSFKPQGEKNTLVAAPYFRDYVRSLATDTLHISSEELDQGGLNVY
TTLDPDMQQAAEDAVEKGMDASSDLETALVSIDPRTGYIKAMVGGKNYRTNQFNHALATT
RQPGSSFKPIMYLTALSSKSMTGLSVFNSQPTLFHYDNDRKTYQPKNFGDKYLGEINMRQ
AIAASDNIYAVNTIMKVGADKVADMAAKMGIASPLQTVPSLALGTSPVTPLEMASAFAVI
GGGGVKLPATAILKITDANGKLLYEAPQTAGEKVVEPAAAYVLTRLMEGVFESGGTGNRV
ASIIKRPVAGKTGTTDTDGWMVGFTPELSTAVWVGYDKGRDIATADGRRAAPIFAQFTEK
ALENVPPKIFPIPDGVVSVYVNPQSGKLATAACPEKVLETFISGTEPKEYCDQHGAGGAV
SPPDGAVTPPAEDVKEEHSLWKDIKRWWMN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgaacctgttacccctccgaaacccaaacaccgcctccgccggctgtcccgg
ctgctggctgtgatgagtgtgctttgtgtactggcggctggcgggctgctcggatacctg
taccacaaggatctcccgccgattgctgatgatatccgttccaagctgcttgattcccgc
ggtaatgtgctgaccaccttcactacggatggccgcagccgggaacccgtaacacttaat
cagatttcaccgctgcttatacaggctacgcttgcggtggaggaccgcaaattctacaaa
cactccggctttgatgtcaaaggcatggggcgggcggtgcttgccaatctggagtcaggc
gaccgcacgcagggcgccagcaccctaacccagcagcttgcgcgcaatctctacctctcc
cacgagaaaacctggacccgcaaggccaaggaagccctgtatacgatgcagcttgagatg
aaatacagcaaagacgaaattctgaatatgtatctgaatcaaatttattatggccatggc
gcctacggcattgaagcggcctcacagatgtattttggtaaagcggcggcagacctcgat
ctggcggagagcgcgatccttgccggcatccccaaaggcccgacctactattccccctac
acccatatggacaatgccaagaaacggcagcggattattctggcagctatgacagaagtg
ggtgatattactgaggctcaggcaacagcagccaggctggagacgctaagcttcaagcca
cagggagaaaagaatacccttgttgctgcgccttatttccgtgactatgtccgcagcctg
gccaccgacaccctgcatatcagcagcgaggagctggatcaggggggattgaatgtatac
acaacactcgatcccgatatgcaacaggcggccgaagacgctgtagagaaaggaatggac
gcctccagcgatctggagaccgcgcttgtatccatagacccccgtaccggctatatcaaa
gccatggtcgggggtaaaaactaccgcaccaaccagttcaaccatgcactggccactaca
cggcagcccgggtcttcttttaagcccatcatgtacttaacggcgctgtcctccaagagc
atgacgggactgtccgtcttcaacagccagccgacactgttccactatgataatgaccgc
aagacctatcagccgaaaaacttcggggacaaatatctgggggaaatcaacatgcgccag
gcgattgccgcctccgacaacatttatgcggtgaacacgattatgaaagttggcgcggat
aaggtggctgacatggcggcaaagatggggatagccagtcccctgcagactgtaccttcg
ctggctctgggcacttcgccggtaactccgctggaaatggcatctgcattcgccgttatc
ggcggaggcggagtaaagcttccggccacggcaatcctgaagatcaccgatgcgaatgga
aagcttctatatgaagccccgcagacggccggcgagaaggtcgtagagccggcggcggcg
tatgtgctgacccggctgatggagggagttttcgagagcggcggtacaggcaaccgcgtt
gcctccattatcaagcgtcctgtcgctggaaagaccggcactaccgataccgacggctgg
atggtgggcttcacgcccgagctgtccacagcggtctgggtcggctatgacaaagggcgg
gatattgccactgccgatggacggcgtgccgccccgatctttgcccagtttacagaaaaa
gcgctggaaaacgttccgccgaaaattttcccgattcctgacggagtggtcagcgtatat
gtaaatccgcaatccggcaagctggctacggcagcctgtcccgagaaggtgctggaaacc
tttatcagcgggaccgaacccaaagaatactgcgatcagcacggtgccggcggtgccgta
agcccccctgacggagccgtgacgcctccggcggaggacgtcaaggaagagcattcgctg
tggaaggatatcaaacgctggtggatgaattag
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