Paenibacillus graminis: PGRAT_05410
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Entry
PGRAT_05410 CDS
T03325
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGRAT_05410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_05410
Enzymes [BR:
pgm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
PGRAT_05410
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGRAT_05410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIQ67132
UniProt:
A0A089M1R3
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All DBs
Position
1217150..1217686
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AA seq
178 aa
AA seq
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MREGYTMDEVPDHLDHGLQIVFIGFNPSLRSGEVGHHYANPRNNFWRILERSGLTPRLYD
ASEDGELLRLGMGFTNIVARPTRGAEDITRQEYAEGRQILREKLARYRPAIACFVGKGVY
TEFSRRPKADWGFQDGQPPIVDGVREFVAPSSSGLVRMPLLEIVAIYRRLYDYIQEGP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgagggagggatataccatggatgaagtgccggatcacttggaccacggcttgcagatt
gtttttatcgggttcaatcccagcctccgttcgggggaagtagggcatcattacgctaat
ccgcgcaataatttctggcgcattctggagcgctccggcctgacgccccgtctctatgat
gcttcagaggacggggaactgctccggctgggcatgggcttcaccaacatcgtcgcccgc
ccgacgcgtggtgcggaagatattacccggcaggagtatgccgagggccggcagattctc
cgggagaagcttgcccgctaccggccggcgatcgcctgctttgtcggcaaaggcgtctat
acggaattcagccgccgcccgaaggcggactggggcttccaggatggccagcctcccatc
gtggacggtgtgcgggagttcgtcgccccctcgtccagcggtctggtccgtatgcccctg
ctggagatcgtagccatttaccgcaggttgtacgattatattcaggaggggccctga
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