Paenibacillus graminis: PGRAT_09925
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Entry
PGRAT_09925 CDS
T03325
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K08693
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase / 5'-nucleotidase [EC:
3.1.4.16
3.1.3.6
3.1.3.5
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00230
Purine metabolism
pgm00240
Pyrimidine metabolism
pgm00760
Nicotinate and nicotinamide metabolism
pgm01100
Metabolic pathways
pgm01110
Biosynthesis of secondary metabolites
pgm01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PGRAT_09925
00240 Pyrimidine metabolism
PGRAT_09925
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PGRAT_09925
Enzymes [BR:
pgm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.5 5'-nucleotidase
PGRAT_09925
3.1.3.6 3'-nucleotidase
PGRAT_09925
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
PGRAT_09925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
5_nucleotid_C
SLH
Metallophos
Motif
Other DBs
NCBI-ProteinID:
AIQ67907
UniProt:
A0A089M408
LinkDB
All DBs
Position
2340125..2344507
Genome browser
AA seq
1460 aa
AA seq
DB search
MGERRWNKPIASILATTVLAAQVLGGVFAVPVLGAGKAEAAGAEAVDPGTPGTINLRLMS
TTDVHTNVMGWDYFKNNSSLTVGLDRTATLVKQAKAEPKGTYNLLLDNGDLIQGTPLGTY
LSKQADPEGKLNQIHPMIAAMNIMGYDAATLGNHEFNYGLNYLESVTSATYATYSHSNNF
PKFPYLNANVYVDDKDNDPANDVNYFTPYKILDKKVKDSNGVEQTIKVGLIGLVTPQIMD
WDKANLEGKVITKDIAATASKFVPQMKAEGADVIVAMAHTGFDKSAVEGDFSENDINALS
KVAGIDAITFSHTHKVFPAADVKSLDASFKDAAGNELPGIDNGKGQINGVPAVQAGYGGG
YLGLIDLAISQDPAKSGHWKVDKSASTSSTRSIYRNENKVNISNVEPDPEVDAAVAANHQ
ATIKYVSEQLGTTNVPMNSYFALVQDDPTVQIVTYAQKRYVENLINTDPSLAQYKGKAIL
SVGAPFKAGRNGPDEYTEIEAGPLTIRSASDLYLYDNTLKAVEVSGATVKEWVEMSAGAF
NRIDPAVSTPQELLNSKFAVYNFDVIDGIKYKIDVTKNAKYNTDGTINDGSSSRVTSITY
NDQPLNMDQKFIVVTNNYRASGGGNFPIKDGKLIIDTLEENRQVLMDYIKEAGTVNQPAD
NNWSIQPIKGDVKVTFTSSPKAKKVLLKDDKITDTGTQNDKGFEIYNLDLSGDVKVHILG
INDFHGQLDTTSYVGDNAVGTAAILATYLKTARAQYANSLLVHNGDSVGASAPVSSRERD
KPTLEWMNLMKFDVGTLGNHEFDQGVAALKAQIFGGVDPVNEKITHAPVNFDYINANAVD
KDTGKPIIKPYTIKEVGGVKIGFIGVVTKATPSKVSPAGTAGVRFLSAEEEVAAIGKYAA
ELQKQGVETIIVLAHDPATTKGDVTTGEAADLAKALPADSPVDVIVAGDNHALANGVVNG
KLIVQAYSYGTAFEDIKLVIDPDTKDVKAKSATVTSTLQKGVEPDAETVALVNKYLKLHP
ELALPVGTTDGSVTRTDAYNNEAPLGNLIADAMRQADFKDGKGIADFAFMNPGGIRADLP
KGNVSFGDLAKIQPFGNTLVKLTLTGEQIKTLLQQQWGTKADGTADTKTLQISGLKYTAN
MYLPVADRIASLTKTDGTPISMTESYTAVVNNFMAAGGDNYSVLTKASESLAGPIDLDVF
YDYVQNTFKGGAITAAIEGRITNNLTASTPAPGQGGGGGGGTAPTATPKPTATPAPAATA
TPAPAATATPAPTPTPAITFGDLGKVAWAQEAINSLAAKGILKGIDGKNFAPNKTVTRAE
FVAMLVRALNLTPSGASTKFSDVKQGVWYTDAIAAAVNAGIVKGSGNGKFEPGREVTREE
MALMIAAALKDQLQPIDSASVLAGFGDKSKIASYAQEAVAQLTQLGIVNGVDGKKFAPKS
DATRAQAAVIIYRMLEKKAS
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagaagatggaacaagccgatagcttcgatattggcgaccaccgttctggca
gcacaagtgctgggcggagtttttgcagttccggttttgggagcaggcaaggcagaagcc
gcaggcgctgaagccgtagatccgggaactcccgggacaattaatctacgcctgatgagc
accacggatgttcacaccaatgtgatgggctgggattattttaagaacaattcatcgtta
acagtggggctggaccggacggcgactttggtgaaacaagccaaagcagagccgaaagga
acatacaatcttctgctcgataacggcgatttgattcaaggcacaccgcttggcacatat
ctgtcgaagcaggctgatccggagggcaagctgaaccaaattcatccgatgattgcggct
atgaatattatgggctatgatgcggcaacacttggcaatcatgaatttaactatggactg
aattatttggaaagtgtaacatcggcaacttatgctacttatagccattcgaataatttt
ccgaagttcccctatttgaatgcaaacgtgtatgtggatgacaaggataacgatcctgcg
aatgatgtaaactattttacgccttacaagattttggacaaaaaagttaaagacagcaac
ggcgttgagcagaccatcaaggtcggtcttattggcttggtgaccccgcagatcatggac
tgggacaaagccaacctggaaggcaaggtcatcaccaaagacattgctgcgacagccagc
aaatttgttccgcaaatgaaggctgaaggtgctgatgtcatcgtcgctatggcgcatacc
ggttttgacaagtccgcagtggaaggcgacttctccgaaaatgacattaatgcgctcagc
aaggtagcgggcattgatgccattacgttctcccatacccataaggtattccctgcagcg
gatgtgaagtcactggacgcatcattcaaggatgccgctggcaacgagctgcctggcatc
gacaatggcaaaggccagattaacggtgttccggcagttcaagccggttatggcggaggc
tatttgggcctgatcgaccttgccattagccaggacccggctaagagcgggcattggaag
gtggacaagtccgcttccacttcctcgacacgttcgatttacagaaacgagaacaaagtg
aatatttccaatgttgaaccggaccctgaggtagacgcggctgttgctgccaatcatcag
gccacaattaagtacgtcagtgaacagctcggcacaacaaacgtacctatgaacagctat
tttgctctggtgcaggatgatccgaccgttcagatcgtaacctatgcccagaagcgttat
gtcgagaatctgattaatacagatccctccttggcccagtataagggtaaggcaattctt
agtgtaggagcacccttcaaggccggacgcaacggtccggatgagtatacggaaatcgag
gcaggaccattgaccatccgcagcgcaagtgacttgtacctctatgataatacgctgaaa
gcggtcgaggtcagtggcgctacggtaaaagagtgggtggagatgagtgcgggtgcattc
aaccgtatcgatccggcagtttccacgccgcaggagctgctcaactccaagtttgccgta
tataatttcgatgttattgacggaattaaatataagattgatgtgaccaaaaatgcgaaa
tacaacacggatggaacaattaatgacggttcctccagccgtgtaacttctattacttat
aatgatcagcctcttaatatggatcagaagtttatcgttgttaccaataactaccgtgcg
agcggcggggggaacttccctatcaaggacggcaagctgatcattgatacgctggaagaa
aaccgtcaggttctgatggattatatcaaggaagcaggtaccgtgaatcagcctgcggac
aacaactggtctatccagccgatcaaaggggatgtcaaagtaacctttacctcatctccg
aaggctaagaaggtattgcttaaggatgacaaaattacggataccggcacacagaacgat
aaagggttcgaaatttataacctcgatctgagcggtgatgtcaaggttcacattcttgga
atcaatgacttccacggccaattggatacaacatcctatgtaggcgacaatgctgtgggc
acagctgccattctggcaacttacctgaaaacggcacgtgcacaatatgcgaactcgctg
cttgtccacaatggagactctgtaggagcttcagctccagtgtcctcaagggagcgcgac
aagccgacgctggaatggatgaacctgatgaagttcgatgtcggaactttgggcaaccat
gagttcgaccagggtgtcgcagcacttaaagcacaaatttttggcggtgtagacccagta
aatgaaaaaattacccatgcacctgtgaattttgactatattaatgccaatgcagtagat
aaagatacaggcaaacctattatcaaaccgtataccatcaaagaagtgggcggtgtgaaa
atcggatttatcggcgtggttaccaaagccactccaagcaaggtatctccggccggcaca
gccggtgtgagattcctgagcgctgaggaagaggttgcggcgattggcaaatatgctgca
gagcttcagaagcaaggcgttgaaacgattattgtccttgcccatgacccggcaaccacc
aaaggggatgtgactacaggcgaagccgcggacttagccaaggctcttccggccgattca
ccggttgatgtcatcgtggccggcgacaatcatgcgcttgccaatggcgtagtgaacggt
aagctgattgttcaggcttattcctacggaaccgcatttgaagacatcaaattggtgatt
gatccggataccaaggatgtcaaagccaaatcagctaccgtaacctcaaccctccaaaaa
ggagtggaaccggatgctgaaacggtggccttggtgaacaagtaccttaagcttcacccg
gagttggccctgccagtcggcactacagacggttcggttacccgtacggatgcctacaat
aatgaagctcctctcggcaacctgattgccgacgctatgcgccaggctgattttaaagat
ggcaaaggcattgcagatttcgccttcatgaatccgggcggcatccgcgccgatcttcca
aaaggcaatgtatcttttggcgacctggcgaagatccagccgttcggcaacacgctggtg
aagctgacgctgaccggtgagcagatcaaaaccctgcttcagcagcaatggggaaccaaa
gctgacggaacggctgacaccaaaacccttcagatctccggtctgaaatataccgcaaat
atgtatctgccggtggctgaccggattgccagcctgaccaagactgacggaacaccgatc
agcatgacagaaagctacacggcagtcgtcaacaacttcatggctgcgggcggcgataac
tacagtgtactgaccaaggccagtgaatccctggcaggtccgatagacctggatgtcttc
tatgattacgttcagaacacatttaagggcggggcgattacggccgcgattgagggccgg
attacgaataacctgacagcttcaacgccagctccgggtcaaggcggcggaggcggaggg
ggtactgcaccaacagctacgccaaaacctacggctacacctgcaccggctgcaacggca
acgcctgcaccggccgcaaccgcaactccggctcctacaccaacgcctgcaatcactttt
ggtgatttaggcaaagtggcttgggcgcaggaagcgatcaattctttggcggccaagggc
atcctaaaaggaattgacggaaagaatttcgctccgaacaagacagtaacacgcgcagaa
tttgttgcgatgctggttcgtgcactgaacctcactccttcaggagcaagcaccaaattc
agcgatgtgaagcaaggggtatggtataccgatgccatagctgctgctgttaacgccggt
attgtgaaaggctccggcaacggcaagttcgagccgggccgtgaagtgacccgtgaagag
atggcgcttatgatcgcggcagcgcttaaggatcaattgcagcccatcgactctgcatcc
gtactggccggctttggcgacaagtcgaaaatcgcttcctatgctcaagaggctgtagcc
cagcttacacagcttggcattgtcaacggagtggatggaaagaaatttgcgccgaagagc
gatgctacccgtgcacaggcagcggtcatcatttaccgtatgctggagaagaaagcttcc
taa
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