Paenibacillus graminis: PGRAT_12305
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Entry
PGRAT_12305 CDS
T03325
Name
(GenBank) hypothetical protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm00052
Galactose metabolism
pgm00511
Other glycan degradation
pgm00600
Sphingolipid metabolism
pgm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
PGRAT_12305
09103 Lipid metabolism
00600 Sphingolipid metabolism
PGRAT_12305
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PGRAT_12305
Enzymes [BR:
pgm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
PGRAT_12305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Lipase_GDSL_2
Polysacc_deac_1
Glyco_hydro_2_N
Glyco_hydro_2_C
Glyco_hydro_2
Lipase_GDSL
Glyco_hydro_2_N2
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
AIQ68306
UniProt:
A0A089M3E9
LinkDB
All DBs
Position
2878957..2887041
Genome browser
AA seq
2694 aa
AA seq
DB search
MQSISKSVKRKRGHNKYFAAVMALVLLFPGVFGGMARDTAYAQETPPQTPPQTQTDSKWY
QNFEQAGEGKTYGISAVGTSSTASVTDRTPGGGSRGSVRLIQTNDNNPSGGAWNTDIYGF
TVTPQKDTVTEGTYYDASDYNYLNFYILDTDVHNPNVVIRDADGKEWNANTDQTLSVKDE
WTRLSIPLDKTKLDFSRIVSISLGEYWGWGNIYYFDEMYFAKSAAALPPAYPGDGLEPSA
PVMYQSFEQPGSDGSYGLAGQGTATVAQRVTADAAYSSSSGSLKMVQNTYTDGEGKERNE
AWNTGVYGAGIKPEGSLTVSGATYMDASPFSYLLFYVKDTTAAAGSSIHVVFKDAEGGVW
DTETSPAVKTQSKQWVKMTVKLDKSKINLSRLQQIELGTYWGYGNVYYYDDLYLAQNETD
ASPAVKPERTALFNDFESRTGYSAGSAATAETSGDIANAAGMAGVMVTTVKNDWPYAVGS
YLSVQPKAGGTFDASAYSYLAFYLKDTQGSNGVEFRIKDANGGVWDTWGTSKSTKNKWVK
MQLSLEGASKIDLTKIVSVDIGFYNAGVYYLDDMYFAMAEDDVLAGFISGAQNIGAVWYQ
NFETKGQDGQYGITAGTEVSTALSMEKSANAYNSASIRAVLSQDSTNPAMNGITVRPQAL
EESPDKNQPYAYQPEFNATNFSHLIFYVWDEQGGQTLSVQLKDAGGKTVDWQTEKTTAAG
WSRIVMPMDKSLKFQFARLSTVTVIPGKAGTYYLDEFYFAKKESAGFPNAGFTQLVLKDV
DGEAMPYSGSLPLGSFEKQKDRTYLSLNGDWKKERTTLDSNLSAAPRDSARTAGLEEEAG
GRQETGYNDSGWAGKTLPLPEDESTAYESLSGPENKSDKSGYQGGVWYRKHFEVNSSLEG
QPAQLTFLGVNYFADVWINGKYAGGHQGGYTPFALDASNLLNYGGDNVIAVRVDNPKWDM
FNNGEILPYATSDWFNYTGILRDAYVEFMPDTYVVRSDVRTLDTDGNLSVRTFLNHTGKT
AEQVQLSYTIYEAKIGESNRLSEYAQDLTGTEAAAAQGSALTVPASGEAVQTLKVKVPKP
KLWSPSEPNLYILKVEQKTGGAVTDTFYTQFGIRTLEADGVQLKLNGELAPFLTGVGYTE
DSSDKGPSLNDATRYSDLLKIKEELKANFVRTGHFPHSLPTYQFADRIGLAIWQEIPAYW
FSGEAFDLQRQRGQAKQMMEEMIFSNYNRPSVWFDGVSNESGGQLERVNFIQELRDAAHA
IDGTRLVGQSAVANPYKGVSDHSHSPADIIGMTMYFGAFYGANPDLETQEEIEAIHALHP
GKPIIATEYGYWTGDETASDTKQTTLFTGTFNAFARIATRAEDGTPNPGGLLSGAAWWTA
YNWYTNITGLQTMGLYHMDRTTPKQVKDILAERYNRYNRISAGTQPNPAGISAWFQSFES
GRGYLSSSPQLQLESAADSAAGNGTKSLKITAGSGADGTYAAFVPQGGAINSDLTGYNYL
NFYAKDSAGDRPLSVTLVDAEGHSWTTETDGKTVKNAWTRLSVPLLKSQGVPLSSRQLNT
LAITQIRIGMNASEQLWVDNFFAATYKTGVEPASYPVGSSGWFQSFEEPDVQVGQGVNAT
AAVDRTFGVNPGGTGSVKLEVTGDAGSPGADKQSVIIKPQGGAASIDASGFNYLAFYVKD
MQGSNTVHVTFVDTDGTVSVNNWTDVSSVKGQWTKVYLPLMKTSADISRLKEIRLSEWNP
GTYYFDDLYFAEYPSDEIPATYTEKIPEKNRPEGQIKVAAVGDSITAGAGLKYAGVTSYP
AQLQSLLGSNFAVKNFGVSGRTLQKDGDDPYWNEAAFAASQTYAPDVVVIQLGTNDTKAW
NWKEGQNHFLGDYKELIQLYQALPSHPKVFVNLPPAVFNDDPNQAYGIVNSVLQNGVIPL
IRKAAEETGATLIDVNAATAGSSSDFPDKIHPNPKGAWTLADTVAKAIRGRLFNIGDTEV
TTWKDGKAGAYSIMYDDGIYESDLRFAGLHEKYNLKGTLALISGWIDNAYNDTGASTGTW
EQWKALLDKGIFDVASHTVTHRNLTTLSASEVSSELKDSVDRIKEKTGYKPESLALPYNT
GNAAVAAEAAKYFVAARQGGNNAGNASSTEQYYNLSSTMVESTTTAVQLDDWTDFGIAKG
NWLILTGHGNDGEGWSSPPLSLYDSHYGYVAQRKDALWNGTFAEVGKYLRERQNATAKAT
KAASGAIEVKLEGTLDPAVYNEPLTLRTKVPAEWNEVTLTRGATSYNLKPVREGEGAFVY
YEAVPGTQMLVISKKGTETPIPDAGTSTPAPSVSVAAADSTKYVLAPGTAELTKALAAAP
PDANGVRTLTFKAGPAAGKTTFELQLPASYLVSMKQVRIQFITPAGSLLLPGDMFAGTAK
DAKQIAVSVKFADLSGADGDVKQAAGSRPVVELGAAVDGNPVSWQNNLATVTFRTPYQLS
SAEALNPSQLTFWQIGENGKGQPVISGRYDSTGSEMIFTTHHFSRYAVVSVAKSFGDLDR
YGWAQAAVEALASKGAIQGVSQHSYSPAQTITRADAVVMIMRLFDLQAQASHSFTDIAQA
DYYYEDVNAARTLGIVRGTGSDEFRPKQPVTRQEMMMMLDKAMLAAGKEYPVGSGEAVPE
FRDASLVSAYARDSVTRAVSAGLFQGYNGYLQPVSPITRAEAAVTLYRLYGIMY
NT seq
8085 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccataagcaaatcggtaaagcgcaagcgggggcataacaaatatttcgcggcg
gtcatggcactggttttgctgttcccgggagtattcgggggaatggcacgagataccgct
tacgcgcaggagacaccaccgcagacaccgccgcagacgcagacagacagcaagtggtat
cagaactttgagcaggccggggaggggaagacctatgggatttctgccgtcggcacctca
tcaacagcgtcggttacagaccggacaccgggaggtggaagtcggggaagtgtgcgcctg
atccagacgaatgacaataatcccagcggcggagcctggaacaccgacatttacggattc
acggtaacgccacagaaggacacagttacagaagggacctattatgatgcttctgactat
aactatctaaatttttacattctggacaccgatgttcataatccgaatgttgtcatccgg
gatgcagacgggaaagaatggaatgccaatacggaccagaccctgtccgtgaaggatgag
tggacgaggctttcgattccgctcgataagacaaaactcgatttttcgcggattgtctcc
atttcgctgggcgagtattggggctggggcaacatctattattttgacgagatgtacttt
gccaaatctgctgccgctctgccgcccgcttatccgggtgatggcttagagccgtcggcg
cctgtcatgtaccagagtttcgaacaacccggcagtgatggcagctatggcttggcaggt
cagggaaccgcgacggtcgctcagcgtgttactgcggatgctgcttattcctcaagctcc
ggcagtcttaaaatggtgcagaatacctatacggacggggaagggaaggaacggaacgaa
gcctggaacaccggcgtttatggagccggaattaaacctgaaggcagcttgaccgtatcc
ggtgcgacgtatatggatgcttcccctttcagttatctgttgttctacgtcaaggatacg
acagcagccgccggatccagtattcatgttgtattcaaggatgccgagggcggggtctgg
gatacggaaacaagcccagcggtcaagacgcagtcgaagcaatgggtgaaaatgaccgta
aagttggacaaatcaaaaattaatttgtccagactgcagcagattgagcttggaacgtac
tggggttacggtaatgtgtactactacgatgatctttatctggcccagaacgaaacggat
gcttcgcctgccgttaagccagagcgcacagccttgttcaatgatttcgagagcagaacc
ggctactctgcaggcagcgctgccaccgccgagacctccggagatatagccaacgcagcg
ggcatggctggtgtcatggtcacgacagtcaaaaatgactggccttatgcggtcgggagt
tatttgagcgtacagcccaaagcaggcgggacgttcgatgcgtcagcttattcatatctt
gctttctatctgaaggacacccagggcagcaatggagtggaattccgtatcaaggacgcc
aacgggggcgtctgggacacgtggggaacctccaaatctaccaagaataaatgggtcaaa
atgcagctttcgctggaaggagcctcgaagattgacctgacaaaaatcgtctccgtcgac
atcggcttttacaatgccggagtgtattatctcgatgatatgtattttgccatggccgaa
gacgatgtactggccggcttcatcagcggagcccagaatatcggagcggtctggtatcag
aatttcgagacgaaagggcaggacggacaatacgggattacggcaggtacagaggtgagc
accgcgctcagcatggagaagtcagcgaatgcatacaactctgcgagcattcgggctgtg
ctgtcccaggattcgactaacccagccatgaatggcataaccgtcaggccgcaggcgctc
gaagagtctccggataagaaccagccttacgcttatcagccggagttcaacgccacaaat
ttcagccatctgatcttttatgtgtgggatgagcagggcggtcagacgctgtccgtacag
ttgaaggatgctggcggcaaaacggtagactggcagaccgaaaagacgacagcagccggc
tggagccggatcgtcatgcctatggacaagagcctgaaattccaatttgcacgccttagc
acggtgacggtgattcccgggaaagcagggacctattatctggatgagttttatttcgct
aaaaaagaaagcgcagggttcccgaatgccggctttacacaattggtgctgaaggatgtg
gacggcgaagcgatgccttattcgggtagtttgccgttgggttcattcgagaagcagaag
gacagaacgtacctctccttaaacggggactggaaaaaagaaagaaccacgctggattcc
aatctgtcagcagcaccccgggacagcgccaggactgccggccttgaagaagaggcgggc
ggcagacaggagaccggctacaacgattccggctgggccggcaagacgctgcctctcccg
gaggatgagagcacagcttacgaatcgctgagcggaccggagaacaagagtgacaagtcg
ggttatcagggcggggtatggtaccgcaagcattttgaggtgaatagctctcttgagggg
cagcctgcacagcttactttcctcggcgtcaactatttcgcggatgtatggatcaatggg
aaatatgcgggcgggcatcagggcggctacacgccgttcgcactggacgcgtccaatcta
ttgaactatggcggcgacaatgtgatcgctgtgcgggttgataatccgaaatgggacatg
ttcaataacggggaaatcctgccgtacgcgacatccgactggttcaactacacaggaatc
ctgcgggacgcctacgttgaatttatgccggacacctatgtggtgcgcagtgatgtgcgt
acgctggatacggatggaaatctgtcggtccgtacgtttctgaatcatacgggtaaaacg
gcggagcaggttcagctgtcctatacaatctatgaagcgaagatcggagagagtaaccgg
ctcagcgaatatgcgcaggatctgacgggtacggaagcggcagcggcgcaaggaagcgca
ttaacggttccagccagcggggaggcggtacaaacgctcaaggtaaaagtacctaaaccg
aagctgtggagtccgtctgaaccgaatctgtatattttaaaggtagagcagaagacaggt
ggagcagtaaccgacaccttctatacccagttcggtatccgtacactggaagcggatggt
gtacagcttaagctgaacggagagttggccccgttcctcaccggggtcggttatacagag
gacagcagcgacaaaggaccttcgctgaatgatgcaacccggtacagcgacctgctgaag
atcaaggaggagctgaaggccaatttcgtccggactgggcattttccgcacagcctgccg
acctatcagtttgccgaccggatcggtctggccatctggcaggaaattccggcctattgg
ttcagcggagaagccttcgacctgcagcgtcagcggggccaggctaagcaaatgatggag
gaaatgatcttcagtaattacaaccgtccttccgtctggtttgacggggtcagcaatgag
tcaggcgggcagctggaacgtgttaactttatccaagagctgcgggacgctgcacatgcc
atcgatggaacaagactggtcggccagtccgccgtggcgaatccgtacaaaggcgtgagc
gaccattcacattccccggccgatatcatcggaatgaccatgtatttcggcgccttctac
ggtgcgaatccagacttggagacacaggaggaaattgaggccatacatgcgctgcatccg
ggtaagccgatcattgctacagagtacggctactggacaggtgatgaaaccgcctcggac
acaaagcagacgacgctgttcaccggtaccttcaatgcatttgcccgcatagctacccgt
gcggaggacggaacgccgaacccgggcggactgttgagcggtgcagcctggtggactgca
tataactggtataccaatattacgggcctgcagacgatgggcttgtatcatatggaccgg
acaacgccgaagcaggtgaaggatattctggccgagcggtataaccggtataaccggatt
tcagccggaacgcagccgaacccggccggtatctcggcttggttccagagttttgaatca
ggccgggggtacttatcttcctcccctcagctgcagctggaatcagcagcagacagtgcg
gccggcaatggcacgaagagtctcaagatcacagcgggctccggcgcggacgggacttat
gccgcatttgttccgcagggcggcgcgatcaacagtgatctgacaggctacaattacctg
aacttctacgccaaggacagcgcgggggacagacctctttccgttacactcgtggatgcc
gaggggcattcctggacaacggagacggatgggaagacggtgaaaaacgcatggacacgg
ctgagtgttccgcttctgaagtcgcagggcgttccactgtccagccggcagctgaatacg
ctggcgattacccagatcaggatcggtatgaacgcttctgagcagctatgggtcgacaac
ttcttcgcggcaacctacaagactggcgtggagcccgcttcgtatcctgtaggttccagc
ggctggttccaatcttttgaggaaccggatgtgcaggtcggccagggtgtgaatgccacc
gcggcggtggaccggacattcggggtcaatcctggaggaacaggaagtgtgaagctggaa
gtcactggagacgccggctcaccgggagcggataagcaatctgtcatcattaagccacag
ggcggcgcagcttccatagatgcttccgggttcaattatctggccttctatgtaaaggat
atgcagggatcgaacaccgtccacgttacctttgtggatacggacggcacggtctccgtg
aacaactggaccgatgtcagttcagtcaaggggcagtggacgaaagtgtatcttccgctg
atgaagacctctgcggatatcagccgtctgaaggaaatccggttgtcggagtggaatccc
ggcacctattattttgacgatctgtacttcgctgagtatccgtcggatgaaattcccgcc
acatatacggaaaagattccagagaagaaccgcccggaaggtcaaatcaaggtagcagcg
gtcggagatagtatcacagctggagccgggctgaaatatgccggggtaacgagttatccg
gcccagctccagtcgctactcggcagcaactttgccgtcaagaacttcggcgtcagcggc
cgcacgctgcaaaaggacggcgacgatccgtactggaatgaagcagcatttgcggccagc
cagacttatgctcctgacgtcgtggttatccagctgggtaccaatgacacgaaagcctgg
aactggaaggaggggcagaaccacttcctgggcgattataaagagctgattcaattatat
caggcgctgccaagtcatccgaaggtctttgtcaatctgccgccggcagtgttcaatgac
gatcccaaccaggcttatggcattgtcaactccgtcctgcaaaacggggtcattcctctg
atccggaaggcggccgaagagacaggcgcaaccctgatcgacgtgaacgcggctacagcc
ggaagcagcagcgacttcccggataagattcatccgaatccgaaaggagcctggacttta
gccgatacagtggccaaagccatccggggcagacttttcaacatcggggatacggaggtc
accacctggaaagacggcaaggccggcgcgtattcgattatgtatgatgatggtatctac
gaatctgatttacggttcgccggattgcatgaaaaatacaacctgaaaggaacgctggcg
ctgatcagcggctggatcgacaatgcctataatgacactggcgcttccacgggcacatgg
gagcagtggaaagcactgctggataaagggattttcgatgtagcaagccatacggttact
caccgcaatctgaccacgctcagcgcgtcagaggtgtcctccgagttgaaggattctgtc
gaccggatcaaggagaagaccggttataagccggaatcactggcgctcccgtacaatacg
ggcaatgcggcggttgcggcggaagcagccaagtatttcgttgctgcgcgccagggaggt
aacaatgccggcaacgccagcagcacagagcagtattacaatctgagcagtacaatggtt
gaaagtacgacaacggctgtccagctggatgattggaccgactttggtatcgccaagggc
aactggctgattctgaccggccatggcaatgatggtgaaggctggtcctcacctccgctc
agtctgtatgacagtcattacggttatgtagcccagcggaaagatgctctttggaacggt
acctttgccgaggtgggcaaatatttgcgtgaaagacagaacgccacagctaaggcaacg
aaagccgcttccggtgcaatcgaggttaagctggagggtacactggacccggcagtatac
aatgagccgctaaccctgagaacgaaggttccggccgagtggaacgaggttactctcaca
cggggagccacttcttataacctgaagccggtccgggaaggtgaaggtgcattcgtctat
tacgaagccgtgcctggaacgcaaatgctggttattagtaagaagggaacggagactccg
attcctgatgccggaacctccacaccggccccttctgtctctgtagccgcagcagacagt
acgaagtatgttcttgctcccggcacagcggagcttacgaaggcgctcgccgccgctccg
ccagatgccaatggagtgcggacgcttacgtttaaggccggaccagctgcgggtaaaaca
acattcgaattgcagctgcctgcctcatatctggtctcgatgaagcaggtgcggatccaa
ttcattacccctgcaggaagtctgctacttccgggggatatgtttgcgggcacggctaaa
gacgcgaagcagattgctgtgtccgttaagttcgcggatctgtccggtgcggatggagac
gtcaagcaggctgcgggcagccgtccagttgtcgagctgggcgcggccgtggatggtaac
cctgtcagctggcagaacaatctagcgaccgttacgttccgcacgccttaccagctttcc
tccgccgaagcgctcaacccgtctcagctgacgttctggcagatcggggaaaacggcaag
ggacagccggtaatcagcggacgatatgacagcacaggcagtgagatgatattcaccaca
catcacttcagccgctatgccgttgtctcagtagccaagagtttcggcgatctggaccgc
tacggctgggcgcaggcagcggtggaagctcttgcttctaagggagctatccagggagtc
tcacagcattcgtattcgcctgctcaaactattacccgagcagatgcggtggtcatgatt
atgcggctgtttgatctgcaggcgcaagcctcccattcctttacggatatagcgcaggct
gattattactatgaagatgtgaatgctgcccggacgctgggcattgttcgcggtacgggc
agtgatgagttccggccgaagcagccggtaacccgtcaggaaatgatgatgatgctggac
aaagccatgcttgcggcaggcaaggaataccccgtgggcagcggggaagcagtgccggaa
ttcagggatgcttctctggtatccgcttatgccagggatagtgtaacccgtgcggtttcc
gctggtttgttccagggctataacggttacttgcagcccgtttcgccgatcacaagggcg
gaagctgctgtcacgctttaccggttgtatggaataatgtactag
DBGET
integrated database retrieval system