Paenibacillus graminis: PGRAT_13055
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Entry
PGRAT_13055 CDS
T03325
Symbol
polYB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_13055 (polYB)
Enzymes [BR:
pgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGRAT_13055 (polYB)
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
PGRAT_13055 (polYB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
Motif
Other DBs
NCBI-ProteinID:
AIQ68439
UniProt:
A0A089NHD1
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All DBs
Position
3042975..3044237
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AA seq
420 aa
AA seq
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MPKDRVILLSDCQAFYASVEKAAHPEYRDKPIAVGDPSRMNGIVLAACPIAKAQGVTTAS
RVGEALAKCPELIVIRPRMGTYIKVSLLISEIYRTYTDLVEPYSIDEQFLDVTGSLAYFG
GSLKDMIQKIQHHVLLSTGVWTRIGIGSTKVMAKMATDNYAKKMKEGIYELTFNQLESTL
WRLPVQDMFMVASRMTKNFWRMGISTIGDIARMELPEFKQRMRTTMGKQSDIQAEYYWQT
ARGLDPSPVVTGIRHQIKSVGHGKALRWNLYTRLTDIEVVLLELVIEVCQRARRYRYMGA
VVSISVLETDGESSCSYERQMTLPEPSSLTHEVAAAALTLFMDNWSGLPVGRLAITLSRL
SDDGVIQLTLFDDRVRSYNKERAIDGIKARYGNQALIRASSLLESGVARERAEQIGGHYR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggatcgtgtcattctactgtccgactgccaagccttttatgcctcggtggag
aaagccgcccatcctgaatatagagataaaccgatcgccgtaggagatccgtccagaatg
aacggcattgtactggcagcctgcccgattgccaaagcacagggcgtaacgacggcctca
cgtgtaggtgaagctttagcaaaatgcccggagctaattgtcatacgcccccgcatggga
acttacattaaggtctcgcttctgatctcggaaatttatcggacctataccgatctggtg
gaaccctacagcatcgatgagcagtttctggatgtcacaggctctcttgcttactttgga
gggtcattgaaagacatgattcaaaaaatccagcaccatgttttgctgtcgacaggcgtc
tggacccggataggcattggttccactaaagtcatggccaaaatggcgacggataattac
gccaaaaagatgaaggaagggatatacgagcttacctttaaccagttggagtccaccctt
tggagactgccggttcaggatatgtttatggtggcgtctagaatgaccaagaatttttgg
cgcatgggtatatccacaatcggagacattgcacgaatggagctgccggagtttaagcag
cgaatgcgaaccaccatgggcaagcagagcgatatccaggcagaatattattggcaaacc
gcgcgcgggctcgatcctagtcccgtagttacaggaatacggcatcagatcaagtccgtg
gggcatggcaaggccctgcgctggaatttatatacccggctgacggatatcgaggttgtg
ctgcttgagcttgtcatcgaggtgtgccagcgggcacggcggtatcgttacatgggggcg
gtggtctctatttccgttttggagacagacggagagagctcatgctcttatgagcgccag
atgacattgcccgagccttcatcgttgacgcatgaagtggccgcagcggcgcttacatta
ttcatggacaactggtccgggctgccggtggggcgcttagccataacgttgtcccgcctt
tcggatgacggggtgatccagcttacgctgttcgatgaccgggtccgctcttacaacaag
gaacgcgcaatcgacggaattaaagcccggtatggaaatcaagccctcatcagggcttca
tctttacttgaatccggagttgcccgggagagagctgaacagattgggggtcattataga
tga
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