Paenibacillus graminis: PGRAT_13505
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Entry
PGRAT_13505 CDS
T03325
Name
(GenBank) primosomal protein DnaI
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pgm
Paenibacillus graminis
Pathway
pgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PGRAT_13505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_13505
Enzymes [BR:
pgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGRAT_13505
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PGRAT_13505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PIF1
Helicase_C_2
Cas3-like_C_2
Flavi_DEAD
AAA_16
Zn_ribbon_6
AAA_19
SLFN-g3_helicase
AAA_30
DAP3
AA9
Motif
Other DBs
NCBI-ProteinID:
AIQ68522
UniProt:
A0A089M5M7
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All DBs
Position
3128368..3130899
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AA seq
843 aa
AA seq
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MEIAKVIVDVPVRSTDRPFDYLIPDSLKLWIEVGSRVAVPFGHRTVQGFVVSLESGETGT
VSGMKPIQEVLDLLPPLSPELVELGDWMSQRYACRRISALQAMLPTALKGKAERLITLGD
AADEGDSTADELFPMFLETDEEENRISEFVGRHGEVSMKLLTRTFPQAAETVKFMLRRGV
LAESQSIKDKMGKKKLKAVDLAIGLSAARESLAGFPARSARQKEVLSFLIDMEAMLPMPM
KDILSILQVTAGTVKALEDKGFIEISEIEVYRDPYRGRDFKPSTPLPLTKEQEAVYNRIA
ATVDEQRHEVFLLHGVTGSGKTEIYLQCIQRCVDQGRQAVVLVPEIALTPQMVERFKGRF
GSGVAVMHSRLSVGERYDEWRKIREGKASVAVGARSAVFAPFMSLGLIIMDEEHESSYKQ
EENPKYHARDVAVRRAEQGGAAVILGSATPSLESYHAARSQSDIHFSPVLLHMPSRALGN
ELPKVHVTDMREELKEGNRSMFSRRLHTALESRLERGEQTVLLLNRRGFSTFVMCRSCGY
VAGCPDCDISLTYHSRSDNLRCHYCGHAEPAPKLCPECGSEHIRFFGTGTQRVEEELGKL
FPGIRVIRMDVDTTTEKGSHEKLLNQFRDKKADVLLGTQMVAKGLDFPDVTLVGVITADS
ALNLPDFRAAEKTFQLLTQVAGRAGRHQLPGEVVVQSYTPEHYSIVHASGHDYHSFVREE
LKHRRELHYPPYCRLILVTLSHEQLPVLLRLAENYALNLQGKARQLRWFGSLDKLSSDAL
DLLGPVASPLPRLKGRYRFQCIIKWRGSIDAIGLAREVAEELEDSVRDTGLQISLDVDPQ
MLM
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggagatagccaaggtcattgtcgatgttcctgtgcgcagcactgaccggccgtttgat
tatttgataccagactcgcttaaattatggattgaggtgggaagccgggtagcagtgccc
tttggacaccgtacggtgcagggttttgtagtatccctggaatccggggagacaggtaca
gtatccggtatgaagccgatacaggaagtgctggatctgcttcccccgctgtctccggag
ctggttgagctgggggattggatgagccaaagatacgcctgcaggcggatatccgcactt
caggcgatgctccctacggctctaaaaggcaaggctgaacggctgataacgctcggcgat
gcagcggatgagggggacagtacggctgacgagctgtttccgatgttcctggagactgat
gaggaggaaaaccggatttcagaatttgtcggacgccatggagaagtctccatgaagctg
ctgacccggaccttcccccaggctgcggagacggtaaagtttatgctccgccgcggcgta
ttggccgagagccagtcaatcaaggacaagatgggcaaaaagaagctcaaggcggttgat
ttggccatagggctctcggcagcccgcgaatcccttgccggatttccggcgcgttccgcc
cgccaaaaagaagtgctgtctttcctgattgacatggaggctatgcttccgatgccgatg
aaggatatattgtcaattctgcaggttacggcggggacagtaaaagccctggaggataag
gggtttattgagatcagcgagattgaggtataccgggacccttaccgggggcgtgatttc
aagcccagcacaccgctgccgttgacgaaagagcaggaagctgtatataacagaattgcc
gcaactgtggatgagcagcgccatgaagtgtttttgctgcatggagttaccggaagcggc
aagacagaaatctatcttcagtgtatacagcgctgcgtggatcaagggcggcaggcggtt
gtgcttgtgcctgagattgctctcacaccgcagatggtcgagcggttcaaaggccgcttt
gggagtggtgtcgccgtgatgcacagccgtttgtctgtgggcgagcggtatgatgaatgg
cgcaaaatccgtgaagggaaagcatcggtggctgtaggcgcccgttccgcggtttttgct
ccgttcatgagtctgggtctcattattatggatgaagagcatgaatcctcctataagcag
gaggagaatccgaaataccatgcccgggatgttgcggtccgccgtgcagagcagggggga
gctgcggttatccttggctccgctacaccttcgctggagagctatcatgcggccaggtcg
cagagcgatattcatttctcgccagtcctgctgcacatgcccagccgtgcacttggcaat
gaattgcccaaggtgcatgtgacggatatgcgggaggagctgaaggaagggaaccgttcg
atgttcagccgccggctccatacggctctggagagccggctggaacgtggggagcaaacg
gtgctcctgctgaaccgcagagggttttccacctttgtgatgtgccgcagctgcggttat
gtggcgggctgtcccgactgtgacatctcgctgacctaccacagccgcagtgataatctc
cgctgccactactgcggccacgccgaaccggcgcccaagctgtgcccggaatgcggaagc
gagcatatccgtttctttggcaccggcacccagcgggttgaggaagagctcggcaagctg
tttcccggcatccgtgtcattcgtatggatgtagacactaccacggagaagggttcgcat
gagaagctgctgaaccagttcagggacaaaaaagccgatgtgctgctgggcacgcaaatg
gtagccaaagggctggactttccagacgttaccctggtgggagtgattaccgccgattcc
gcgctgaacctgcctgatttccgggcggcagaaaaaactttccagctgctgacacaggtt
gccggcagggcaggacgccatcagcttccaggcgaagtggttgtgcagtcctatacgccg
gagcattattccatcgttcatgccagcgggcatgattaccactcttttgtacgtgaagaa
ctgaagcaccgccgggaactgcattaccctccttattgcaggctgattcttgtcacgctt
tctcatgaacagctgccggtgctgctgcgtttggcggagaattatgcgctgaacctgcag
ggcaaagcgcggcagctgcgctggttcggcagtctggacaagctgtcctccgatgcgctt
gatctgctgggtcctgtcgcatccccgcttccccggctaaaaggccggtaccggttccaa
tgtatcatcaaatggcgcggctctattgatgccatcggactggcccgtgaagtggcggaa
gagctggaggattcggttcgtgataccggactgcagatcagcctggatgtagatccgcaa
atgttgatgtaa
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