Paenibacillus graminis: PGRAT_17405
Help
Entry
PGRAT_17405 CDS
T03325
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgm03016
]
PGRAT_17405
Enzymes [BR:
pgm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PGRAT_17405
Transfer RNA biogenesis [BR:
pgm03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PGRAT_17405
Prokaryotic type
PGRAT_17405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
TerS_N
Motif
Other DBs
NCBI-ProteinID:
AIQ69208
UniProt:
A0A089MCJ4
LinkDB
All DBs
Position
complement(3961712..3962662)
Genome browser
AA seq
316 aa
AA seq
DB search
MEIYFLGTNAGVPTLQRNVTSVALRLLEERRSFWMFDCGEGTQHQVLRSPLRLGKLEKLF
ITHLHGDHLFGLPGLLSSRGYQGGTGPLTVYGPPGLKAYLDISLSVSQSRIPYPLEVVEH
SGGLIFEDDGFKVEAGLLEHRIDSYGYRVTEKDSPGNLNKELLLSYGLKPGPLYGLLKKG
QDVTTEEGVLIRAAEVVNAPKRGRIVTVLGDTRPCQGTLPLAWDADLIIHEATFGHDLEG
MAHQYHHSTARQAAELARDAGGRELLLTHFSSRYTTHEELLPLLAEAREIFPQTLLAEEF
CTFPVYRRTPGNVPGK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttactttttgggtaccaatgccggggtaccaacgctgcagcggaatgtaacc
tcggttgcactccgcctgctggaagaacggcgaagcttctggatgttcgattgcggagaa
ggtacacagcaccaggttctccgttccccgctgcggctggggaagctggagaagctgttt
ataactcatctgcacggtgaccacttgttcggcttgccgggtctattgtccagccgcggg
tatcagggcggcacaggcccgcttacagtgtatggtccgcctggtctcaaagcctatctg
gacatctcgttatcagtcagccagtcccggattccttacccgcttgaggttgttgaacat
agcggaggacttatcttcgaggatgacggttttaaggtcgaggccggtctgctggagcac
cggattgacagctatggctaccgggtgacggagaaagacagtccaggcaatctgaataag
gagctgctgctgagctatggcctgaagccggggccgctttatggccttttgaaaaaaggg
caggatgtaacgaccgaggaaggcgttctgatccgcgcagcggaggtggtcaatgctcca
aagcggggacggatagtaactgtgctgggagataccagaccttgccaagggaccctgccg
cttgcatgggatgcagatctgattatccatgaggcaacctttggccatgatctggaggga
atggctcatcaatatcatcacagtacagcccgtcaggctgctgagctggcgcgtgatgca
ggcgggcgtgagctgctgctgacacacttcagttcacgttataccacacatgaagagctg
cttccgctgctggcggaggcccgggaaatctttccgcagacattgctggcggaggaattc
tgcacttttcctgtgtaccggagaacgccgggaaatgtcccgggaaagtga
DBGET
integrated database retrieval system
