Paenibacillus graminis: PGRAT_17625
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Entry
PGRAT_17625 CDS
T03325
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pgm
Paenibacillus graminis
Pathway
pgm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PGRAT_17625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgm03400
]
PGRAT_17625
DNA repair and recombination proteins [BR:
pgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PGRAT_17625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_27
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIQ69243
UniProt:
A0A089MCM9
LinkDB
All DBs
Position
complement(3998259..4001099)
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AA seq
946 aa
AA seq
DB search
MANYTPMIQQYLKVKEGAKDAFLFFRLGDFYEMFFEDAILASKELEITLTGREGGGEERI
PMCGVPYHAAEGYIQRLIEKGYKVAICEQLDDPAVTKGMVRRDIVRVVTPGTVMDGKIIS
DKNNNYLVCVTEEDGMMALAACDLTTGELYVTSVLSGAEWLRDEIGIYEPAEIIGDAALL
DMLRSEASLLAKPVVYTPWEKREEELARRQFGEAAWVRLEKERGLCLALLISYLSETQRR
SLGQLSQISPYEPGNYMILDPFTRRNLELTETVRERSKKGSLLWLLDRTETSMGGRLLRR
RIDKPLLQRAPIERRLEAVDYLYNQFIVREDLRGALKEIYDLERLVGRIAFGSANGRDMN
ALKLSLAQIPALKDMCIASGSATLREIGASMDECAELREDIDRAIVEEAPVSVRDGGIIR
TGYHERLDELREASSSGKRWIAELEAKERQATGIKSLKIGYNKIFGYYIEITRSNLSSLP
EGRYERKQTLANAERFVTPELKEKEALILEAQDKMTDLEYSLFIELRDRISAQIPRLQAL
AEKVAEIDVYQCLAAVSAEHRFVKPKLSEGYDLRLEGGRHPVVEAVLKDAAFIANGSTLS
KEEGNILLITGPNMAGKSTYMRQVALICILAQIGCFVPAGSAEVPLIDRIFTRIGAADDL
IGGQSTFMVEMADIQVMTEKATARSLIIIDELGRGTSTSEGMAIAQAVIEYVHDTIACKA
LVSTHFHELAHLEQSLRGLRNYSMAVQESGDKVNFLRKLVPGAADSSYGIYCARLAGLPE
GIIDRAYGLLQSIEQAAPPGTLSLNYGSGYTEHTGQGIQENQALAVPPDSGEGPAAGGQA
YASTRSGSVHSGGGSSDAALAAVRLETAVSLASSAAEEDHEVVQLSIFGEEEPRKNRKGG
AAAPAAKENPLVKELISAVQSADLMNMTPLQAMGLLNELKMKAKEL
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattatacgccgatgatacagcaatatttgaaagtgaaggaaggagccaaagac
gctttcctttttttccgtctgggcgatttctatgaaatgttttttgaggatgcgattctt
gcgtcaaaggagcttgagatcacattaacaggccgcgagggtggaggcgaagagcgcatt
cccatgtgtggtgtgccttaccatgccgccgaggggtacatacagcgcctgattgaaaaa
ggctacaaggtcgccatctgcgagcagctggatgatccggcagtaacgaaggggatggtc
cggcgtgatattgtccgcgtagtgacaccgggcacggtgatggacggcaagatcatttcc
gataaaaacaacaattaccttgtctgtgtgactgaagaggacgggatgatggcactcgct
gcctgtgatttgaccacaggtgagctgtatgtcacttctgtgctctcgggtgccgaatgg
ctcagggatgaaatcggcatttatgaaccggccgagattatcggggatgccgcgctgctg
gatatgctgcggagtgaagcctcgctgcttgcgaagccggttgtctatactccgtgggag
aagcgcgaggaagagctggcccgccgccagttcggtgaagccgcttgggtgcgtctggag
aaagagcgcggcctttgcctcgcactgctgatctcctatctgagcgaaacccagcggcgc
tccctgggccagctgagccagatttcgccgtatgaaccggggaattatatgattctggac
ccgttcacccggcgcaatctggagctgaccgaaaccgtgcgcgagcgttccaaaaaaggc
tcgctgctctggctgcttgaccgtaccgaaacgtcgatgggcggccgtctgctgcgccgc
agaattgacaagccgctcctgcagcgtgcgccgattgaacggaggctggaggcggtcgat
tatttgtacaaccagtttatcgtgcgggaggatctgcgcggagcgctcaaagagatctac
gatctggagcggctggttggacggatcgcctttggcagcgccaacggccgtgacatgaat
gccctgaagctgtcgctcgcccaaattccggcgctgaaggacatgtgtatcgcatccggc
tcggcgacgctgcgggagattggcgccagcatggatgaatgtgccgagctgcgcgaggat
atcgaccgggcgattgttgaagaagctccggtatcggttcgggatggcggaattatccgt
acaggctaccatgaacgtctggatgagctgagggaagccagcagcagcggcaaacgctgg
attgccgagctggaggccaaggagcgccaggccacggggatcaagtccctgaagatcggc
tataacaaaatcttcggttattatattgaaatcacccgttccaacctgtcttccctgccg
gaaggaagatatgagcgcaagcagacgctggcgaacgccgagcgtttcgttacaccggag
ctgaaagagaaggaagccttgatcctggaagcacaggacaaaatgaccgatttggaatac
agcctctttatcgagctgcgtgaccggatcagtgcgcagattccccgtcttcaggcatta
gccgaaaaggtggccgagatcgatgtgtaccagtgcctggcggcggtcagcgccgagcac
cggtttgtgaagcctaagctgtctgaaggctatgatctgcggctggaaggcggacggcat
ccggttgtggaggcggtgctgaaggatgcggcatttattgccaacggcagcacgctcagc
aaggaagaaggcaatattctcctgatcaccggcccgaacatggcaggaaaaagcacttat
atgcgccaggttgccctcatctgcatcctggcccagattggctgctttgttccggcaggc
agtgcggaggttccgctgattgaccgcatctttacgcggatcggagcagcggatgatctg
atcggcggccagagcacctttatggtggagatggcggatatccaggtcatgaccgaaaaa
gcaacggcgcgcagcctgatcatcatcgacgaactgggccggggcacttcaacaagcgaa
gggatggcgattgcccaggcggtgatcgaatatgtgcatgacaccatcgcctgcaaggct
ttggtctcgacacattttcatgagctggcccacctggagcagagtctccggggattgcgc
aactactcgatggctgtacaggaaagcggcgacaaagtcaacttcctgcgcaagctcgtg
ccgggagcggctgacagcagctacgggatttattgcgcccggctggcaggccttcccgaa
ggcattattgaccgggcgtatggactgcttcagagtattgagcaggctgcccctccggga
acgctttcgctcaattatggttcaggctatactgaacataccgggcagggtattcaagag
aatcaggcattggctgtgccgccggattccggagaaggcccggcagccgggggccaagcc
tatgcctccacgcgcagcggttcagtacattcaggcggcggttcgtccgatgctgccttg
gcggctgtccggttagaaacggccgtttcgcttgcctcttccgcagcggaggaggaccat
gaggttgtccagctctctatttttggggaggaagaaccgcgcaagaaccgcaagggcggg
gcagccgctccggcggccaaggagaatccgctggttaaagagctcatctccgccgtgcaa
agcgcagacctcatgaacatgacgccgctgcaggcgatgggcttgctgaacgagttgaag
atgaaggccaaggagctttaa
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