Paenibacillus graminis: PGRAT_17875
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Entry
PGRAT_17875 CDS
T03325
Name
(GenBank) dimethylallyladenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pgm
Paenibacillus graminis
Brite
KEGG Orthology (KO) [BR:
pgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgm03016
]
PGRAT_17875
Enzymes [BR:
pgm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PGRAT_17875
Transfer RNA biogenesis [BR:
pgm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PGRAT_17875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
EIF4E-T
Motif
Other DBs
NCBI-ProteinID:
AIQ69286
UniProt:
A0A089M657
LinkDB
All DBs
Position
complement(4048861..4050468)
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AA seq
535 aa
AA seq
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MTTGNNSPDLKSGKGGSKDYSKYFDFSDAKVISEEEGKTTYRIKGRTVQINSNPDYKEGK
RRGKQDIEVINFDNVETNKIMEEFREINRHKQHYYSIATYGCQMNEHDTETMKGLLEQMG
YMGTEDRNMADIILLNTCAIRENAEDKVFGELGHLKNLKLEKPGLLLGVCGCMSQEEGVV
NRIMSKHGFVDMIFGTHNIHRLPQLVKEAYFSKELVVEVWSKEGDIIENLPKKREGMRAW
VNIMYGCDKFCTYCIVPFTRGKERSRRPEDVIAEMRELARQGFKEVTLLGQNVNAYGKDF
TDIDYTFGDLMDDMRKIDIPRIRFMTSHPRDFDDRLIEVLGKGGNLTEHIHLPVQSGSTA
VLKKMSRKYSRETYLELVQKIKASVPNAVLTTDIIVGFPGETEEQFEDTLSLVREVGYDM
AYTFIYSPREGTPAASMEDNVPPEVKSERLQRLNDLIKEQSRISNDRMLGEIVEVLVEGE
SKNNSNVLSGRSRANKLVHFEGPKELIGTFVQVRITDTKTWYIKGDCMAEAVSIL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggggaataactcaccggacttaaaatccggcaagggtggttcgaaggattac
tccaagtattttgatttctctgatgccaaagtcatcagtgaagaagagggcaaaacgacc
taccggatcaagggccgcacggttcagatcaactcgaatccggattacaaggaaggcaaa
cgccggggtaagcaggatatagaggttattaatttcgacaatgtggaaacgaataagatt
atggaagagttcagagagatcaaccgccacaaacagcattattactcgatagctacctac
ggctgccagatgaatgagcatgataccgagactatgaaggggcttctggagcagatgggc
tacatgggtaccgaagaccgcaacatggcggatatcattctgctgaacacatgcgccatc
cgcgagaatgctgaagacaaggtgttcggggagctgggtcacctcaagaatctgaagctg
gagaagcctggcctgttgcttggggtctgcggctgcatgtcccaggaggaaggcgtggtc
aaccggattatgtccaagcacggattcgtggatatgatcttcggtacccacaacattcac
cgcctgccgcagctggtcaaggaagcgtacttcagcaaagagctggtcgtggaggtctgg
tccaaggaaggcgacattattgagaacctgcccaagaaacgggaggggatgcgcgcttgg
gtgaatatcatgtacggctgcgataagttctgcacctactgtattgtgccgttcacacgg
ggcaaggagcgcagccgccggcctgaagatgtcattgccgagatgcgggagctggcccgc
caaggcttcaaggaagtcaccctgctgggacagaatgtaaatgcctacggcaaggatttt
acagatatagactatacattcggggacctgatggacgatatgcggaagatcgatattccc
cgcatccgcttcatgacctcgcatccccgtgattttgacgatagattgattgaagtgctc
ggcaaaggcggcaacctgacggagcatatccacctgccggtacagtcgggaagcacagcc
gtgctgaaaaaaatgagccgtaaatacagccgcgaaacgtatctggaacttgttcaaaaa
atcaaggccagtgtcccgaacgccgtgctgactaccgatattattgtcgggttccctggc
gaaaccgaagagcagttcgaagatacattgtcgctggtgcgcgaagtgggctatgatatg
gcatatacctttatttattcaccgcgcgaagggacgccagcagcctcgatggaggataat
gtgccgccagaggtgaagagtgaacgcctgcagcgtttgaatgatctgattaaggagcag
agccggatcagcaatgaccggatgcttggggagatcgtcgaggtgcttgtggaaggcgag
agcaaaaacaattcgaatgtgctgtccggccgcagccgggccaacaagctggtgcatttt
gaagggccgaaggaactgatcggcacctttgtgcaggttagaattacggatacgaagaca
tggtacatcaagggggattgcatggcggaggccgtgtcaattctataa
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